DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and Phf20l1

DIOPT Version :9

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:XP_006520979.1 Gene:Phf20l1 / 239510 MGIID:2444412 Length:1018 Species:Mus musculus


Alignment Length:1228 Identity:234/1228 - (19%)
Similarity:383/1228 - (31%) Gaps:427/1228 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   608 PKQTE-VELPESKPAVNIPKSERILSAEVETTSSPLVPPECCTLESVSGPVLLETSLSTEE---- 667
            |.:.| ::..|.|..|:..:........:...|:.|.|.|        .|.|.:..|..||    
Mouse    30 PSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDSNRLRPLE--------RPALRKEGLKDEEELFD 86

  Fly   668 -KSNENV-------ETTPLKTEAAKEDSP------------------PAAPEEEASNSSEEPNFL 706
             |:.|.|       ...|.|.||..::..                  .|.||:      .:..||
Mouse    87 FKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQFYDGVIRCLKRMHIKAMPED------AKGQFL 145

  Fly   707 LEDYESNQEQVA----EDEMMKCNNQKGQKQ---------TPLPEMKEPEKPVAETVSKKEKAME 758
            .:  ..:|..::    .|....||...|.:.         ....:.|...||.|...|.|||..:
Mouse   146 FQ--VKSQHPLSWCCPIDPAGSCNQSMGSEDWIALVKAAAAAAAKNKTGTKPRASANSNKEKERD 208

  Fly   759 ---------NPARSSPAIVDKKVRAGEMEKKVVKSTKG---------TVPEKKMDSKKSCAAVTP 805
                     ..|.:|..||     ..|:|||....|..         |||:......:|  .:|.
Mouse   209 GGKWFKLPSKKAETSTCIV-----TAEIEKKEELPTSSETFVGLHIDTVPKIVFPQPES--TLTN 266

  Fly   806 AKQKESGKS--AKEAILKKETEKEKSSAKLDSSSPNTLDKKGKDTAQWSPQLQTLPKSSTKPPQE 868
            .::...|.|  ||.|.|.|.|....|.|            .|.|.|:.....     |:|.|   
Mouse   267 KRKNNQGNSFQAKRARLNKITGLLASKA------------VGVDGAERKEDC-----SATAP--- 311

  Fly   869 SAPSVISKTTSNQPAPKEEQHAAKKGLSDNSPPSVL-------KAKEKAV-------SGFVECDA 919
                |:.:..|.:|..:::..|.....::...|::|       ||:.|..       ||.::...
Mouse   312 ----VLEQAISPKPQSQKKNEAVISSSANTQKPALLSSTLSSGKARSKKCKHESGESSGCIKTPK 372

  Fly   920 MFKAMDLANAQLRLDEKNKKKLKKVPTKVEAPPKVEPPTAVPVPGQKKSLSGKTSLRRNTVYEDS 984
            ...|.:|..|:   |.....:|..|..|..:|..|.||...     |.|...:.|.|..|:....
Mouse   373 SPLAPELIQAK---DLTLVSQLSSVINKTSSPQPVNPPRPC-----KHSERRRRSQRLATLPMPD 429

  Fly   985 PNLERNSSPSSDSAQANTSAGKLKPSKVKKKINPRRSTICEAAKDLRSSSSSSTPTREVAASSPV 1049
            .:||:.||.|        ||...|...:..: |.::|::.|.      .:.:..|.:::....|:
Mouse   430 DSLEKLSSSS--------SATDGKAFSISSQ-NQQQSSVPEV------PAIAYVPLQKLGPCLPL 479

  Fly  1050 STSSDSSSKRNGSKRTTSDLDGGSKLDQRRYTICEDRQPETAIPVPLTKRRFSMHPKASANPLHD 1114
            ..|  ..|:..||:.......||.         |...:.|   ..||           .|||...
Mouse   480 DLS--CGSEVTGSRTPHPSYHGGE---------CPREEKE---ETPL-----------FANPTSK 519

  Fly  1115 TLLQTAGKKRGRKEGKESLSRQNSLDSSSSASQGAPK--KKALKSAEILSAALLETESSESTSSG 1177
            .:....|                     ::|:.|..|  ||            ::.|...||:.|
Mouse   520 VVSDVKG---------------------AAAATGISKTEKK------------VKLEEKTSTAFG 551

  Fly  1178 SKMSRWDVQTSPELEAANPFGDIAKFIEDGVNLLKRDKVDEDQRKEGQDEVKRE---------AD 1233
            .:..: |.:                         |::|.|:|..|..|.:.|::         :|
Mouse   552 KRKEK-DKE-------------------------KKEKRDKDHYKPKQKKKKKKKKKSKQHDYSD 590

  Fly  1234 PEED--EFAQRVANMETPATTPTPSPTQSNPEDSASTTTVLKELETGGGVRRSHRIKQKPQGPRA 1296
            .|:.  :|.:|.::..|.::..:.:|..:..|   .|||.                    |.|||
Mouse   591 YEDSSLDFLERCSSPLTRSSGSSLAPRSTFTE---KTTTY--------------------QYPRA 632

  Fly  1297 SQGRGVASVALAPISMDEQLAELANIEAINEQFLRSEGLNTFQLLKE----NFYRCARQVSQENA 1357
            .            :|:|.....|:::|.:::....|..|:..:..::    ||.....:....|.
Mouse   633 I------------LSVDLSGENLSDVEFLDDSSTESLLLSGDEYNQDFDSTNFEESQDEDDALNE 685

  Fly  1358 EMQCDCFLTGDEEAQGHLSCGAGCINRMLMIECGPLCSNGARC----TNKRFQQHQCWPCRVFRT 1418
            .::|.|.|  |||....:.|.          ||  ||...:.|    .:...:|:.|:.||    
Mouse   686 IVRCICEL--DEENGFMIQCE----------EC--LCWQHSVCMGLLEDSIPEQYICYICR---- 732

  Fly  1419 EKKGCGITAELLIPPGE----------------------FIMEYVGEVIDSEEFERRQHLYSKD- 1460
                        .|||:                      |:.|.... :::::.....||.:.. 
Mouse   733 ------------DPPGQRWSAKYRYDKEWLNNGRMYGLSFLKENYSH-LNAKKIVSTHHLLADVY 784

  Fly  1461 ----------------RNRHY---YFMALRGEAVIDATSKGNISRYINHSCDPNAETQKWTVNGE 1506
                            :|:|:   :..|..|:......:.....|.|......|:|.::...|.:
Mouse   785 GVTEVLHGLQLKIGILKNKHHPDLHLWAYSGKRKDQDQAVAEAERKITPQDRANSEGKECVQNHK 849

  Fly  1507 LRIGFFSVKPIQPGEE--ITFDYQYLRYGRDAQRCYCEAANCRGWIG-GEPDSDEGEQLDEESDS 1568
                    :|....||  ||.::.|       |:....:.:|:.... |..|.|:....:|    
Mouse   850 --------EPALRMEETYITSEHSY-------QKPQSFSQDCQSLTDPGSSDDDDASSFEE---- 895

  Fly  1569 DAEM---DEEEL--------EAEPEEG------QPRKSAKAKAKSKLKAKLPLAT--GRKRKEQT 1614
            |.|:   |:..|        |..|..|      ..:|..:....|.|:.:|.|.|  ...:.|.|
Mouse   896 DGELRVPDKSHLLYKNRGVSEKNPASGNKVFVYNDKKGTEGPGDSHLQWQLNLLTHIENVQNEVT 960

  Fly  1615 KPKDREYK----AGRWLKPSATGSSSSAEKPPKKPKVNKFQAMLEDPDVVEELSLLRR 1668
            ...|...|    ...||                     .|...||.||.:..|..|:|
Mouse   961 SRMDLIEKEVDVLESWL---------------------DFTGELEPPDPLARLPQLKR 997

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 AWS 1358..1410 CDD:197795 13/55 (24%)
SET 1414..1533 CDD:214614 23/162 (14%)
PostSET 1535..1551 CDD:214703 2/15 (13%)
WW 2014..2043 CDD:278809
SRI 2270..2348 CDD:285448
Phf20l1XP_006520979.1 MBT 3..68 CDD:388438 7/37 (19%)
TUDOR 90..135 CDD:119391 6/44 (14%)
PTZ00449 <320..511 CDD:185628 46/227 (20%)
PHD20L1_u1 323..388 CDD:374703 12/67 (18%)
PHD_PHF20L1 688..733 CDD:277103 16/74 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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