DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and set-19

DIOPT Version :10

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_001379854.1 Gene:set-19 / 180834 WormBaseID:WBGene00020919 Length:953 Species:Caenorhabditis elegans


Alignment Length:1071 Identity:205/1071 - (19%)
Similarity:350/1071 - (32%) Gaps:359/1071 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1280 GVRRSHRI-------KQKPQGPRAS----QGRGVASVALAPISMDEQLAELANIEAINEQFLRSE 1333
            |:.|:.|:       |:|.|.|...    :|:.|..::..|   ||            ||..||:
 Worm     8 GMMRTVRMNAIRPSSKEKEQRPTPKLPLIKGKSVPMISELP---DE------------EQNHRSK 57

  Fly  1334 --GLNTFQLLKENFY-RCARQVSQENAEMQ--------CDCFLTGDEEAQGHLSCGAGCINRML- 1386
              ...||..::.|.. ....:.::|..||.        |||  ..|::...:..|....:.:.| 
 Worm    58 WPETATFVTIERNVLGNYISESAKEAIEMGLNRRNKVCCDC--GPDDDCSKNPDCKCYQMGKELQ 120

  Fly  1387 -------------------MIECGPL--CSNGARCTN-------KRFQQHQCWPCRVFRTEKKGC 1423
                               |...||:  ||.|..|..       |...:.......|.|.:.||.
 Worm   121 KYFKSDFLVYGKPVKIMDSMYWDGPMFACSEGCGCRGDCDLNGLKDIDKDHDKKYNVTRRDGKGF 185

  Fly  1424 GITAELLIPPGEFIMEYVGEV----------------IDSEEFERRQHLYSKD---RNRHYYFM- 1468
            .:.....|..|:.::.:.||:                :...|.:.|...:.:|   .|:.|..: 
 Worm   186 CLFTMFQIEKGQPVLAFNGEITGYHSINKKPAVEQYALQLSEGDPRLSSFIRDCNVLNKDYKDVL 250

  Fly  1469 --ALRGEAVIDATSKGNISRYINHSCDPNAETQKWTVNG----ELRIGFFSVKPIQPGEEITFDY 1527
              ||..:..::...|||.:|:::|:|..|.|..:....|    ::||..|:.:.|..|.|:||  
 Worm   251 RNALETKLWVNPLEKGNCARFLSHACQANLELGRVFQGGFSFADVRIVLFAKETIPAGSELTF-- 313

  Fly  1528 QYLRYGRDAQR------CYC-------------EAANCRGWI-GGEPDSDEGEQLDEESDSDAEM 1572
               .||.|.:.      |.|             ..|..|.:: ...|:|:..::..:.|...||.
 Worm   314 ---HYGPDYKEKFLEDLCLCYTCFVPTIVRTSRRIARKRAYVREPTPESERCKRARDRSIIAAET 375

  Fly  1573 DEEELEAEPEEGQPRKSAKAKAKSKLKAKLPLATGRKRKEQTKPKDREYKAGRWLKPSATGSSSS 1637
            .|.|:|   |..:.|.:.||:....||.||..:..|:.:   .|:::.       .|..:.||||
 Worm   376 IEAEIE---EAHEKRMALKARKAFLLKRKLRKSNVRRTE---SPENKR-------SPVQSSSSSS 427

  Fly  1638 AEKPPKKPKVNKFQAMLEDPDVVEELSLLRRGGLKNQQDTLRFSRCLVRAKLLKTRLALLR---- 1698
            :                              |..:....:|| ||..||.   .|||..:|    
 Worm   428 S------------------------------GSTEGNVSSLR-SRSDVRK---STRLVGVRSSSS 458

  Fly  1699 --VLTHGELPCRRLFLDYHGLRLLHAWISENGNDDQLREALLDTLESLPIPNRTMLSDSRVYQS- 1760
              |.|:                  ||...:.|  .|....:..||:     .|......|:..| 
 Worm   459 ISVATN------------------HAQSQDPG--FQPHSGVTRTLK-----GRFCRQSGRIAVSR 498

  Fly  1761 --VQLWSNSLEQQLAVVPQEKQAALHKRMVALLQKWQALPEIFRIPKRER--------------- 1808
              :||.:|...||..   :...:.:.|....:.:|.:...|:....||.|               
 Worm   499 SLLQLRANKRRQQST---EGDASGVRKNEGLVARKERERKELMLFSKRSRPQTCFMGVKSSGRDS 560

  Fly  1809 -IEQMKEHEREAD--------RQQKHVHASTALEDQRERESSNDRFR-QDRFRRDTTSSRIGKPI 1863
             :......|||..        |.:.||..|:.........:|..|.| ..|.|..||.:|:  |:
 Worm   561 SMSSTTSSERERSPSLTESPVRSRNHVRGSSPQSSGLNERASRCRERVTRRTRLQTTPARV--PV 623

  Fly  1864 RMSGNNTICTITTQQKGSNGAPDGMTRNDNRRRSDIGPPSEQRRTLSKELRRSLFERKVALDEAE 1928
            .:...:.|.....|                 |..::..|..:.||.|:                 
 Worm   624 ELESVSPIPARVRQ-----------------RSPEVQSPKSEMRTRSR----------------- 654

  Fly  1929 RRVCTEDRLEHELRCEFFGADINTDPKQLPFYQKTDTNEWFNSDDVPVPAPPRTELLTKALLSPD 1993
                        .||:  |.|:..|        ::.|.:....|   |...||   :|::..:  
 Worm   655 ------------ARCD--GYDVERD--------QSKTGDVVQID---VDGSPR---ITRSHAN-- 689

  Fly  1994 IDVGQGATDVEYKLPPGVDPLPPAWNWQVTSDGDIYYYNLRERISQWEPPSPEQRLQTLLEENTT 2058
             :...|...::.| |...|.:|                :|...|..:.|...|..::.::|....
 Worm   690 -NHPMGHRKIQEK-PIVEDAIP----------------HLEPIIDGYHPERNESVVRDVMEPLDV 736

  Fly  2059 QQPL-----HELQIDPAVLENELIQ---VDTDYVGSLSAKSLAQYIEAKVRERR----------- 2104
            |.|.     |:..:.|.  .|:.::   :.:||...|::.:........:|:.:           
 Worm   737 QIPQMNGEHHQTFVSPT--SNKSLRRCGLRSDYSSVLNSPASTSQESTGMRDTQRLNKVLSKNNI 799

  Fly  2105 -DLRRSKLVSIRLISPRRDEDRLYNQLESRKYKENKEKIRRRKELYRRRKIEVLPDAVDEIPVPG 2168
             :|...:|...|::||.|...::.|.::|..:  |...:..::.:..||.|.    .|.|||   
 Worm   800 GELESPRLNGTRVLSPPRTRHQISNAIDSDAF--NDMPVLTQEPVQERRMIA----QVFEIP--- 855

  Fly  2169 KALPIQPYLFSSDEEETKVAAIEQPAAEEEQ 2199
                            .|..|..||::...|
 Worm   856 ----------------RKTTAYNQPSSSNSQ 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 valS <709..832 CDD:237855
AWS 1358..1410 CDD:197795 16/88 (18%)
SET_SETD2 1410..1551 CDD:380949 39/186 (21%)
WW 2014..2043 CDD:459800 3/28 (11%)
SRI 2266..2355 CDD:462404
set-19NP_001379854.1 SET 175..322 CDD:214614 35/151 (23%)
Blue background indicates that the domain is not in the aligned region.

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