DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Set2 and set-5

DIOPT Version :9

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_001256612.1 Gene:set-5 / 179973 WormBaseID:WBGene00008145 Length:1558 Species:Caenorhabditis elegans


Alignment Length:1476 Identity:290/1476 - (19%)
Similarity:493/1476 - (33%) Gaps:498/1476 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 VRDLLNKNRKAHKIQIEARIDSNPSTGHS-------------------------QSGTTAASTSM 116
            |...|||||:...::. ::.|.:|...||                         :||...:..:.
 Worm   311 VNVFLNKNRQLFLMKY-SKTDKSPLNVHSLDRKTKDYELYLKEQMTKLLAGMPDESGRETSQAAN 374

  Fly   117 STATASAASASSAATV-----SRLFSMFEMSHQSLPPPPPPPTALEIFAKPRPTQS-------LI 169
            .....:|........:     :|:||       .||||||||  ||:..:..|..|       |:
 Worm   375 EVEVQAAMENVEEGEIVPESGNRVFS-------PLPPPPPPP--LEMSRESSPISSVSGKSIKLL 430

  Fly   170 VAQVTSEPSAVGGAHPVQTMAGLPPVTPRKRGRPRKSQLADAAIIPTVIVPSCSDSDTNSTSTTT 234
            ..|:                         |....:|:....::.:........:......|....
 Worm   431 TLQL-------------------------KETMHKKNSFFHSSYVKKEETGIINGESIQVTKKAE 470

  Fly   235 SNMSSDSGEL----PGFPIQKPKSKLRVSLKRLKLGGRLESSDSGNSPSSSSPEVEPPALQDENA 295
            |:..|||..:    |....:.|:...:..::|     :..::.||     |..|::.|.....:.
 Worm   471 SSQFSDSSPILLVNPHVHTEAPEPTPKEHMER-----KWSTTHSG-----SMGELQRPVTSQSSR 525

  Fly   296 MDER-PKQEQNLSRMVDAEENSDSDSQIIFIEIETESPKGEEEQEEGRPVEV-EPQDLIDIDMEL 358
            ...| ...|::|.|.:.|..::.:..:...:|:||.  :.||.|:..|.|.| :|:|        
 Worm   526 KSSRWDVTEEDLKRKLSATSSTHNPRERASVELETR--QSEEIQKLQRLVNVIKPRD-------- 580

  Fly   359 AKQEPTPDPEEDLDEIMVEVLSGPPSL------W-----SADDEAEEEED--ATVQRATPPGKEP 410
            ...|.|.:.:....||.:|..|..|.|      |     |.||.|:...|  .|..::.|..:: 
 Worm   581 DSLEGTSNLDAANREIPIEASSTAPLLSRSFQFWRERSKSPDDSAQNHSDLHGTSLKSRPDAQK- 644

  Fly   411 AADSCSSAPRRSRRSAPLSGSSRQGKTLEETFAEIAAESSKQILEAEESQDQEEQHILIDLIEDT 475
              :....|..::....|:|...|...|            .|.:...:|:|               
 Worm   645 --NPIPQAVAKTMLKFPVSTLDRPVNT------------KKSMAFGQEAQ--------------- 680

  Fly   476 LSESEVTSSVSPTIEHMVVEEVVVEENQLVDEADEILDSKQEFVIKKVFSESDNIAASLN----- 535
                                 ::.:.:..|:.|.:|   .|:|||.|..| |||..|:.|     
 Worm   681 ---------------------IMPKSSVFVNNAVKI---PQKFVIVKEAS-SDNPNAAENPVSTQ 720

  Fly   536 -----KDIFEPKVETKATC---GEVVPRPEMVTEDVYITEGIAATLEKSAVVTKPTTEMIAETKL 592
                 .||.....:.|.|.   |...|..   :||....:.||           |||:::.|   
 Worm   721 NTVDLHDIPSKTPQQKVTSENRGSGAPNS---SEDQQKLDEIA-----------PTTQILPE--- 768

  Fly   593 SDEVVIEPPLKDESDPKQTEVELPESKPAVNIPKSERILSAEVETTSSPLVPPECCTLESVSGPV 657
                          ||             |::.....:.....||:...:.|      |.:.|..
 Worm   769 --------------DP-------------VSVQSRSDVCEVTAETSQKSVGP------ERIGGDA 800

  Fly   658 LLETSLSTEEKSNENVETTPLKTEAAKEDSPPAAPEE-----EASNSSEEPNFLLEDYESNQEQV 717
                     :.|:||  |..::........|...|::     :::.||.|          ||:|:
 Worm   801 ---------QSSSEN--TVSVRNRVDLHGIPSKTPQKLVQSGKSAQSSTE----------NQQQI 844

  Fly   718 ---AEDEMMKCNNQKGQKQTPLPEMKEPEKPVAETVSKKEKAMENPAR-------------SSPA 766
               .|..::..|....|.:||:.|    |:|.:.::|:...:.::|.:             .|..
 Worm   845 EMTPEARILSKNPISAQSKTPVKE----ERPESHSLSESFASTQHPMKISEISENSTQNRSDSSR 905

  Fly   767 IVDKKVRAGEMEKKVVKSTKGT------VPEKKMDSKKSCAAVTPAKQKESGKSAKEAILKKETE 825
            |..:.|:..::..:.:|..:.|      .||.::..:..    |....:.|....:..|.::|.|
 Worm   906 IGLRSVKLEQIPSRTIKVEEPTDFPSNSEPEAQIPLETR----TLEPSEASSVQPEPPIDQEEAE 966

  Fly   826 KEKSSAKLDSSSPNTLDKKGKDTAQWS--PQLQT---LPKSSTKPPQESAPSVISKTTSNQPAP- 884
            .:::...|..:|| |:|   :|.||.|  |....   |||  .:|..|.....:.:.|.....| 
 Worm   967 NDENPEILTPNSP-TID---QDEAQNSDAPDASADSDLPK--LEPELERMIDFLVEITEKISVPA 1025

  Fly   885 -----------------KEEQHAAKKGLSDNSPPSVLKAKEKAVSG--------FVECDAMFKAM 924
                             |||  ..::.......|.:.:....::..        .|:.||.|...
 Worm  1026 IKTDIWKLYQARMKQNVKEE--CIRQRFMSKLAPIIHRLDNYSIEARVRIIFVLSVKVDADFLKE 1088

  Fly   925 DLANAQLRLDE---------------------------KNKKK----LKKVP-TKVEAPPKVEPP 957
            ...||.:|:|:                           ||:|:    :|.|. .|.||...|:. 
 Worm  1089 LRKNAVVRVDDEQLITKYVSCNDGGLKLEGNHSMSDRLKNRKRSLDLIKDVDCEKKEAEHDVKK- 1152

  Fly   958 TAVPVPGQKKSLSG-------------KTSLRRNTVYEDSPNLERNSS-------PSSDSAQANT 1002
                   .|||.||             ..:.|:..|.|:|.|.:|.||       .||:.:..:.
 Worm  1153 -------TKKSTSGSENDTDAEETDFHSITERQPKVVENSENRKRASSAKRRLVTSSSEESDQDD 1210

  Fly  1003 SAGKLKPSKVKK-KINPRRSTICEAAKDLRSSSSSSTPTREVAASSPVSTSSDSSSKRNGSKRTT 1066
            .:.:.|..|.:| ..|.:||:.....:.|..||..|  .||   ..|..::|...:|.:|:|:..
 Worm  1211 RSSRSKTEKQRKIAANEKRSSTASRVRILSDSSDES--NRE---EGPSCSNSKKLTKISGNKKNP 1270

  Fly  1067 SDL------DGGSKLDQRRYTICEDRQPETAIPVPLTKRRFSMHPKASANPLHDTLLQTAGKKRG 1125
            :.|      |...|.|:...|.|           |.:|:|    ||.:.|            |:.
 Worm  1271 AILRKRLLGDSSDKSDKDERTSC-----------PSSKKR----PKLAEN------------KKN 1308

  Fly  1126 RKEGKESLSRQN-SLDSSSSASQGAPKK--KALKSAEILSAALLETESSESTSSGSKMSRWDVQT 1187
            ..:.|..||..| ..|.:..|.....||  |.:|:.:  .....:...:.:||..|::...|:| 
 Worm  1309 ASQPKRCLSGSNVKSDKNEKAGCSGTKKQEKVVKNKK--KPPTPKANENTTTSDHSRIETDDIQ- 1370

  Fly  1188 SPELEAANPFGDIAKFIEDGVNLLKRDKVDEDQRKEGQDEVKREADPEEDEFA----QRVANMET 1248
               .|...|....|. :..|:.:|               .||.|  |...|..    :.||..:.
 Worm  1371 ---FEGVYPIEPCAP-VSSGMPIL---------------SVKTE--PRSTEHLSFSYENVAYTQA 1414

  Fly  1249 PATTPT---PSPTQSNPEDSASTTTVLKELETGGGVRRSHRIKQKPQGPRASQGRGVASVALAPI 1310
            ..::.|   |.||:         |..|.:..|  .:||                       |..:
 Worm  1415 EFSSTTYACPEPTE---------TISLHDFLT--LLRR-----------------------LLIL 1445

  Fly  1311 SMDEQLAELA-NIEAINE----QFLRSEGLNTFQLLKENFYRCARQ 1351
            ...|:||||| ||:.|:|    :.:.:..:|:  :|...||:..|:
 Worm  1446 LQCEELAELARNIKTISETGGDEKIPTNRINS--VLDVAFYKIQRK 1489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 AWS 1358..1410 CDD:197795
SET 1414..1533 CDD:214614
PostSET 1535..1551 CDD:214703
WW 2014..2043 CDD:278809
SRI 2270..2348 CDD:285448
set-5NP_001256612.1 SET 36..151 CDD:214614
PHA03309 <793..1008 CDD:165564 51/255 (20%)
SPK 1006..1118 CDD:214732 15/113 (13%)
PTZ00108 <1115..1328 CDD:240271 59/252 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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