DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and set-21

DIOPT Version :10

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_500555.2 Gene:set-21 / 177204 WormBaseID:WBGene00021282 Length:568 Species:Caenorhabditis elegans


Alignment Length:526 Identity:103/526 - (19%)
Similarity:193/526 - (36%) Gaps:109/526 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1122 KKRGRKEGKESLSRQNSLDSSSSASQGAPKKKALK-SAEILSAALLETE------SSESTSSGSK 1179
            :|...|..|.|:...:  |.||:|.....:.||:: ..:...|..:||:      |::.||...:
 Worm     6 EKLKSKAQKRSIGEND--DKSSNAEPPRKRSKAMRLPTDDEDAKYVETKRALKKYSADKTSEMLR 68

  Fly  1180 MSRWDVQTSP-ELE----------AANPFGDIAKFIEDG------------------VNLLKRDK 1215
            :.::..:..| :||          ..:.:.|..:.::|.                  :|||:|.:
 Worm    69 VIKFAFKAPPFKLELPVYLRYSSYQLSSYRDRCQLLKDNSELTRINVEPNIITLNAHLNLLERIR 133

  Fly  1216 VDEDQRK--EGQDEVKREADPEEDEFAQRVA------NMETPATTPTPSPTQSNPEDSASTTTVL 1272
            .|.:...  |.|:...::........|||:.      |:.........:.|:..||.........
 Worm   134 DDPELNTYYEYQETENKDLGRCMRFIAQRIVMARTNNNLMKHLLAEQGTSTEITPESLQEYFPAY 198

  Fly  1273 KELETGGGVRRSHRIKQKPQGPRAS--QGRGVASVALAPISMDEQLAELANIEAINEQFLRSEGL 1335
            :..:....::.:....:....|..|  :|..:.|:.: |:::.....::..::...|..| ::.:
 Worm   199 EPPKNRIRIKSNLTFNENDVIPVYSDLEGETLESLEI-PVTLTYDYTDVNMVDQFTEPNL-TKAI 261

  Fly  1336 NTFQLLKENFYRCARQVSQ------ENAEMQCDCFLTGDEEAQGHLSCGAGCINRMLM------- 1387
            ...:...||..||....|:      ||.  :|.||:. ::..||......||......       
 Worm   262 IMSEENGENMIRCTCCSSKPIVPCYENE--KCPCFIM-NQRMQGFQIPREGCGKTEFTSFKPIYF 323

  Fly  1388 ------------IECGPLCSNGARCTNKR--FQQHQCWPCRVFRTEKK-GCGITAELLIPPGEFI 1437
                        ..|..||..|.:|||..  ....:.:|..::|.:.. |..:.:.::||.|..:
 Worm   324 FNPKDHYYDHAGFACSELCGCGGKCTNNSMLLPHKKLFPLEIYRNDPAVGFVVRSTVMIPAGTPL 388

  Fly  1438 MEYVGEVID--SEEFERRQHLYSKDRNRHYYFMAL------------------RGEAVIDATSKG 1482
            ||:.||:::  :.|.:.|.:.|....:....|..|                  |....||....|
 Worm   389 MEFTGEIVELKNMELDNRDYAYQITYSDDVKFRRLLQEVKFSKEYTKLLEKLSRKRFFIDPKIHG 453

  Fly  1483 NISRYINHSCDPNAET----QKWTVNGELRIGFFSVKPIQPGEEITFDY--QYLRYGRDAQRCYC 1541
            |::|.:.|:|.||.|.    ||......|.:...:::.:.|...:|.||  .|....:|  ||.|
 Worm   454 NVARTVGHACAPNMEVVRVFQKSLSPAHLHLVLVTLEDVFPSVPLTIDYGKTYTDVLKD--RCRC 516

  Fly  1542 EAANCR 1547
            ....||
 Worm   517 RTFACR 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 valS <709..832 CDD:237855
AWS 1358..1410 CDD:197795 14/72 (19%)
SET_SETD2 1410..1551 CDD:380949 40/165 (24%)
WW 2014..2043 CDD:459800
SRI 2266..2355 CDD:462404
set-21NP_500555.2 SET <336..503 CDD:394802 39/166 (23%)
Blue background indicates that the domain is not in the aligned region.

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