DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and set-23

DIOPT Version :10

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_741320.1 Gene:set-23 / 176969 WormBaseID:WBGene00021515 Length:244 Species:Caenorhabditis elegans


Alignment Length:223 Identity:69/223 - (30%)
Similarity:103/223 - (46%) Gaps:46/223 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1361 CDCFLTGDEEAQGHLSCGAGC-INRM--------------LMIECGPLCSNGARCTNKRFQQHQC 1410
            |:|      ||:...:.|..| ||::              |:|||...|:.....|:.|.:..||
 Worm    27 CNC------EAECSSAAGCSCLINKIDNYTVDGKINKSSELLIECSDQCACILLPTSCRNRVVQC 85

  Fly  1411 WP---CRVFRT--EKKGCGITAELLIPPGEFIMEYVGEVIDSEEFERRQHLYSKDRNRHYYFMAL 1470
            .|   ..:|.|  ..||.|:.|...|..|||:.||.||.|..:|.|||...:..|.|   |.:.|
 Worm    86 GPQKKLEIFSTCEMAKGFGVRAGEQIAAGEFVCEYAGECIGEQEVERRCREFRGDDN---YTLTL 147

  Fly  1471 R----GEAV---IDATSKGNISRYINHSCDPNAETQKWTVNGEL-----RIGFFSVKPIQPGEEI 1523
            :    |:.|   :|...:|||.|::||||:||.|    .:...|     ..|.|:.:.|..|||:
 Worm   148 KEFFGGKPVKTFVDPRLRGNIGRFLNHSCEPNCE----IILARLGRMIPAAGIFAKRDIVRGEEL 208

  Fly  1524 TFDYQYLRY-GRDAQRCYCEAANCRGWI 1550
            .:||.:... |.:.:.|.|::..||.::
 Worm   209 CYDYGHSAIEGENRKLCLCKSEKCRKYL 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 valS <709..832 CDD:237855
AWS 1358..1410 CDD:197795 15/63 (24%)
SET_SETD2 1410..1551 CDD:380949 53/159 (33%)
WW 2014..2043 CDD:459800
SRI 2266..2355 CDD:462404
set-23NP_741320.1 SET 1..241 CDD:394802 69/223 (31%)
Blue background indicates that the domain is not in the aligned region.

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