DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set2 and set-13

DIOPT Version :10

Sequence 1:NP_572888.2 Gene:Set2 / 32301 FlyBaseID:FBgn0030486 Length:2362 Species:Drosophila melanogaster
Sequence 2:NP_494371.1 Gene:set-13 / 173626 WormBaseID:WBGene00019690 Length:402 Species:Caenorhabditis elegans


Alignment Length:379 Identity:81/379 - (21%)
Similarity:135/379 - (35%) Gaps:110/379 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1248 TPATTPTPSPT--------------QSNPEDSASTTTVLKELET-------GGGVRRSHRIKQKP 1291
            |..|....|||              .|:..::.||.|..|..|.       |..:|.:..:..|.
 Worm    14 TTFTDSNISPTSLIFSSKMSSRTLRSSSSSNAISTKTQPKTEEAPLIPVTKGPVIRMTSNMADKA 78

  Fly  1292 QG-----PRASQGRGVASVALAPISMDEQLAELANIEAINEQFLRS--EGLNTFQLLKENFYRCA 1349
            |.     |..|:...:....|.              |.:|:..:.:  ||:..     ||...|.
 Worm    79 QNDHSMWPSTSKFESIWGNVLG--------------ERVNKSTIAAIREGMKI-----ENKVTCG 124

  Fly  1350 RQVSQE-NAEMQCDCFLTGDEEAQGHLSCGAGCINR-------------MLMIECGPLCSNGARC 1400
            .:..|: :....|.||.|. ...:.|.  |:..:.|             ..|..|...|....:|
 Worm   125 CRPGQDCSTNPACRCFQTA-SRLREHF--GSDILTRGKPVKTVDTMYWDRPMFACSGSCGCKGQC 186

  Fly  1401 TNKRFQQHQCWPCRVF---RTEKKGCGITAELLIPPGEFIMEYVGEVID---------------- 1446
            .....|.....|.:.|   ||:.||..:.:..:|..|..::|:.||:.|                
 Worm   187 NLNALQDICEDPAKKFKITRTDGKGFCVYSARVIKKGSPVLEFSGEITDYLAIKSNADIEQYSIM 251

  Fly  1447 --------SEEFERRQHLYSKDRNRHYYFMALRGEAVIDATSKGNISRYINHSCDPNAETQKWTV 1503
                    .:.|.:.::|.||  .:...:.|.|.:|.|:..::||.:|:.:|.|..|.|..:...
 Worm   252 LYNNETKLCDFFSKEENLSSK--YKKILWSAYRSKAWINPLNRGNCARFFSHGCKANMELGRVFQ 314

  Fly  1504 NG----ELRIGFFSVKPIQPGEEITFDYQ------YLRYGRDAQRCYCEAANCR 1547
            .|    :::|..|:.:.|:||.|:||:|.      :|     ..:|.|||  |:
 Worm   315 GGFSPADMKIVLFAKEIIKPGTELTFNYGPSYKEIFL-----GNKCLCEA--CK 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set2NP_572888.2 valS <709..832 CDD:237855
AWS 1358..1410 CDD:197795 12/64 (19%)
SET_SETD2 1410..1551 CDD:380949 43/175 (25%)
WW 2014..2043 CDD:459800
SRI 2266..2355 CDD:462404
set-13NP_494371.1 SET 200..348 CDD:214614 36/149 (24%)
Blue background indicates that the domain is not in the aligned region.

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