DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1998 and CER3

DIOPT Version :10

Sequence 1:NP_572887.1 Gene:CG1998 / 32300 FlyBaseID:FBgn0030485 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_200588.2 Gene:CER3 / 835889 AraportID:AT5G57800 Length:632 Species:Arabidopsis thaliana


Alignment Length:307 Identity:61/307 - (19%)
Similarity:96/307 - (31%) Gaps:125/307 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 KVIWC----VVC--------------NQIFVGIPLAYASYRLMEI--RGLSDIRDLP-TFHW--- 245
            ||:||    ::|              |.:||        .|.:.|  :|: |.:.:. .:||   
plant    40 KVLWCIHILIICGLKALVHELWSVFNNMLFV--------TRTLRINPKGI-DFKQIDHEWHWDNY 95

  Fly   246 ----------VCFE----------------------LTVCILMEELGFYYSHRLLH-HKHIYKYI 277
                      :|:.                      :.:.:...|..:|:.||..| :.:.:.:.
plant    96 IILQAIIVSLICYMSPPLMMMINSLPLWNTKGLIALIVLHVTFSEPLYYFLHRSFHRNNYFFTHY 160

  Fly   278 HKQHHEWTAPISVTAIYCHPIEHIFSNLLP--PFLGVFLMGSHVATAWLWFA-----LAILSTLN 335
            |..||....|..:||.....:|:|...::.  |.:|..|.|....:|...:|     :..|...|
plant   161 HSFHHSSPVPHPMTAGNATLLENIILCVVAGVPLIGCCLFGVGSLSAIYGYAVMFDFMRCLGHCN 225

  Fly   336 AHSGYH-----LP----FFPSPEAHDFHHLKF--NNC-----FGVLGVLD-----------RL-- 371
            .....|     ||    ...:|..|..||.:.  |.|     |.|||...           ||  
plant   226 VEIFSHKLFEILPVLRYLIYTPTYHSLHHQEMGTNFCLFMPLFDVLGDTQNPNSWELQKKIRLSA 290

  Fly   372 -------------HGTDSL--------FR--ATKSYARHIMMLSFKP 395
                         ||.|.:        ||  |:..|...|.:|...|
plant   291 GERKRVPEFVFLAHGVDVMSAMHAPFVFRSFASMPYTTRIFLLPMWP 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1998NP_572887.1 FA_hydroxylase 250..374 CDD:397991 37/173 (21%)
CER3NP_200588.2 PLN02869 5..623 CDD:166510 61/307 (20%)

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