DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1998 and SMO2-2

DIOPT Version :10

Sequence 1:NP_572887.1 Gene:CG1998 / 32300 FlyBaseID:FBgn0030485 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_565681.1 Gene:SMO2-2 / 817488 AraportID:AT2G29390 Length:272 Species:Arabidopsis thaliana


Alignment Length:276 Identity:84/276 - (30%)
Similarity:123/276 - (44%) Gaps:41/276 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 QSQWDKFIDSFGDEPMVLWVFGTTIFTMLVYWTVGTLYTFMDLTNRPACLRKYKIQPGTNEPVE- 199
            :|.|...:..|.|  ..|...|:.|....|::..|..|.|::   |...|..||||..:|.|.. 
plant     6 ESGWKYLVTHFSD--FQLACIGSFILHESVFFLSGLPYIFLE---RTGFLSNYKIQTKSNTPEAQ 65

  Fly   200 ---VRRLLKVIWCVVCNQIFVGIPLAYASYRLMEIRGLSDIRDLPTFHWVCFELTVCILMEELGF 261
               :.|||....|       |.:||..|||.:....|:.....||::..|..::....::|:..|
plant    66 GKCIARLLLYHCC-------VNLPLMMASYPVFRFMGMESSFPLPSWKVVSAQILFYFIIEDFVF 123

  Fly   262 YYSHRLLHHKHIYKYIHKQHHEWTAPISVTAIYCHPIEHIFSNLLPPFLGVFLMGSHVATAWLWF 326
            |:.||:||.|.:||.:|..|||:..|..:|:.|.||.|.:|.. ....:|..|.|.|:.|.|||.
plant   124 YWGHRILHTKWLYKNVHSVHHEYATPFGLTSEYAHPAEILFLG-FATIVGPALTGPHLITLWLWM 187

  Fly   327 ALAILSTLNAHSGYHLPFFP--------------------SPEAHDFHH----LKFNNCFGVLGV 367
            .|.::.|:.||.|||.|:.|                    |.:.||:||    .|..|.......
plant   188 MLRVIETVEAHCGYHFPWSPSNFLPLYGGSLILMWESFAYSADFHDYHHRLLYTKSGNYSSTFVY 252

  Fly   368 LDRLHGTDSLFRATKS 383
            :|.:.|||..:|..|:
plant   253 MDWIFGTDKGYRKLKA 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1998NP_572887.1 FA_hydroxylase 250..374 CDD:397991 46/147 (31%)
SMO2-2NP_565681.1 FA_hydroxylase 112..259 CDD:397991 46/147 (31%)

Return to query results.
Submit another query.