DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1998 and ch25hl1.2

DIOPT Version :10

Sequence 1:NP_572887.1 Gene:CG1998 / 32300 FlyBaseID:FBgn0030485 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001076393.1 Gene:ch25hl1.2 / 798384 ZFINID:ZDB-GENE-050419-90 Length:276 Species:Danio rerio


Alignment Length:283 Identity:73/283 - (25%)
Similarity:116/283 - (40%) Gaps:51/283 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 WQSQWDKFIDSFGDEPMVL---WVF-------------GTTIFTMLVYWTVGTLYTFMDLTNR-- 181
            :|:.||     ||.:..||   |.:             ...:.|:..|:.:...|...|:..|  
Zfish     7 FQTIWD-----FGTKDSVLQPIWDYVRLNHSETLRSPLFPVVLTVSSYFVLVLPYLSCDILGRKW 66

  Fly   182 PACLRKYKIQPGTNEPVEVRRLLKVIWCVVCNQIFVGIPLAYASYRLMEIRGLSDIRDLPTFHWV 246
            ||..| |||||  ::......||......:.|.|.:.||.|.|.:.......|.:  ..||...:
Zfish    67 PAIYR-YKIQP--DKLPTTAMLLHCSGVTLYNHILLVIPAAVAQWMWRPPIPLPE--QAPTLLEL 126

  Fly   247 CFELTVCILMEELGFYYSHRLLHHKHIYKYI--HKQHHEWTAPISVTAIYC----HPIEHIFSNL 305
            ...:|..:|:.:|.::..| .||||..:.|:  |..||.::||.:: |..|    ..:...|...
Zfish   127 VGGVTGNLLLFDLQYFIWH-FLHHKIRWLYVTFHAIHHNYSAPFAL-ATQCLGGWELVTVGFWTT 189

  Fly   306 LPPFLGVFLMGSHVATAWLWFALAILSTLNAHSGYHLPF----------FPSPEAHDFHHLKFNN 360
            |.|    .|:..|:.|.|::..:.:..::..|.||..|:          :..|..||.||.|.|.
Zfish   190 LNP----VLLRCHLLTTWMFMVVHVYVSVEDHCGYDFPWSTSRLIPFGVYGGPSKHDVHHQKPNT 250

  Fly   361 CFGV-LGVLDRLHGTDSLFRATK 382
            .|.. ....|::.||.:.||.:|
Zfish   251 NFAPHFSHWDKMFGTHADFRFSK 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1998NP_572887.1 FA_hydroxylase 250..374 CDD:397991 36/140 (26%)
ch25hl1.2NP_001076393.1 FA_hydroxylase 134..265 CDD:397991 35/136 (26%)
Histidine box-1. /evidence=ECO:0000255 144..148 1/4 (25%)
Histidine box-2. /evidence=ECO:0000255 159..163 1/3 (33%)
Histidine box-3. /evidence=ECO:0000255 240..246 3/5 (60%)

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