DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1998 and Msmo1

DIOPT Version :10

Sequence 1:NP_572887.1 Gene:CG1998 / 32300 FlyBaseID:FBgn0030485 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_079712.1 Gene:Msmo1 / 66234 MGIID:1913484 Length:293 Species:Mus musculus


Alignment Length:265 Identity:84/265 - (31%)
Similarity:128/265 - (48%) Gaps:36/265 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 WQSQWDKFIDSFGDEPMVLWVFGTTIFTMLVYWTV---GTLYTFMDLTNRPACLRKYKIQPGTNE 196
            :::.|...:|::....:..|  |:.|....:|:..   |.|:.|:..      :||||||....|
Mouse    33 FKNAWVYMLDNYTKFQIATW--GSLIVHEAIYFLFSLPGFLFQFIPY------MRKYKIQKDKPE 89

  Fly   197 PVEVR-RLLKVIWCVVCNQIFVGIPLAYASYRLMEIRGLS-DIRDLPTFHWVCFELTVCILMEEL 259
            ..|.: :.||.|   :.|..|:.:||...:|...|...:. |...:|.::........|.::|:.
Mouse    90 TFEGQWKCLKKI---LFNHFFIQLPLICGTYYFTEFFNIPYDWERMPRWYLTLARCLGCAVIEDT 151

  Fly   260 GFYYSHRLLHHKHIYKYIHKQHHEWTAPISVTAIYCHPIEHI-----FSNLLPPFLGVFLMGSHV 319
            ..|:.|||||||.|||||||.|||:.||..:.|.|.||:|.:     |      |:|:.|:..||
Mouse   152 WHYFLHRLLHHKRIYKYIHKVHHEFQAPFGIEAEYAHPLETLILGTGF------FIGIVLLCDHV 210

  Fly   320 ATAWLWFALAILSTLNAHSGYHL--------PFFPSPEAHDFHHLKF-NNCFGVLGVLDRLHGTD 375
            ...|.|..:.:|.|::.||||.:        ||:.....|||||:.| .|........|:|.|||
Mouse   211 ILLWAWVTIRLLETIDVHSGYDIPLNPLNLVPFYTGARHHDFHHMNFIGNYASTFTWWDKLFGTD 275

  Fly   376 SLFRA 380
            :.:.|
Mouse   276 AQYHA 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1998NP_572887.1 FA_hydroxylase 250..374 CDD:397991 52/137 (38%)
Msmo1NP_079712.1 FA_hydroxylase 143..274 CDD:397991 52/136 (38%)
Histidine box-1 157..161 3/3 (100%)
Histidine box-2 170..174 2/3 (67%)
Histidine box-3 249..255 4/5 (80%)

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