DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1998 and agmo

DIOPT Version :9

Sequence 1:NP_001285210.1 Gene:CG1998 / 32300 FlyBaseID:FBgn0030485 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_998048.2 Gene:agmo / 405819 ZFINID:ZDB-GENE-040426-2207 Length:446 Species:Danio rerio


Alignment Length:171 Identity:39/171 - (22%)
Similarity:53/171 - (30%) Gaps:80/171 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 WVCFELTVCILMEELGFYYSHRLLHHKHIYKYIHKQHH--------------------EW----- 284
            |:.|      |..::|:|:.||..|..:|....|:.||                    .|     
Zfish   117 WLAF------LGVDMGYYWFHRFAHELNILWAGHQVHHSSEYYNLSTALRQSVTQQFSSWIFYSP 175

  Fly   285 ---TAPISVTAIYCHPIEHIFSNLLPPFLGVFLMGSHVATAWLWFALA--------ILSTLNAHS 338
               ..|.||.|:      ||..|||..|             |:...|.        ||:|     
Zfish   176 LALLIPPSVFAV------HIQFNLLYQF-------------WIHTELVKDLGPLELILNT----- 216

  Fly   339 GYHLPFFPSPEAHDFHHLKFNNCF-----GVLGVLDRLHGT 374
                     |..|..||.:...|.     |:|.:.||:.||
Zfish   217 ---------PSHHRVHHGRNPYCIDKNYAGILIIWDRMFGT 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1998NP_001285210.1 ERG3 <245..374 CDD:225546 37/169 (22%)
FA_hydroxylase 250..374 CDD:282034 35/164 (21%)
agmoNP_998048.2 ERG3 <91..252 CDD:225546 39/171 (23%)
FA_hydroxylase 118..248 CDD:282034 36/168 (21%)
Histidine box-1 131..135 2/3 (67%)
Histidine box-2 144..148 1/3 (33%)
Histidine box-3 220..224 1/3 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3000
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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