DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1998 and ch25hl1.1

DIOPT Version :10

Sequence 1:NP_572887.1 Gene:CG1998 / 32300 FlyBaseID:FBgn0030485 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001017865.1 Gene:ch25hl1.1 / 336673 ZFINID:ZDB-GENE-030131-8617 Length:282 Species:Danio rerio


Alignment Length:270 Identity:66/270 - (24%)
Similarity:111/270 - (41%) Gaps:29/270 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 ASGDFWQSQWDKFIDSFGDEPMVLWVFGTTIFTMLVYWTVGTLYTFMDLTNRPACLRKYKIQPGT 194
            ||....|..||..:  .....::...|...:.....|......:..:|:....|.|.|||||...
Zfish    16 ASDRLLQPLWDYLL--LRHYTLISSPFFPVLLAFSSYIIFSVPFAVLDVLGEKAPLFKYKIQKDR 78

  Fly   195 NEPVEVRRLLKVIWCVVCNQIFVGIPLAYASYRLMEIRGLSDIRDLPTFHWVCFELTVCILMEEL 259
            :..|.:  :|:.:|..|.|.:...:|....:..:|.:..|..:  .||. |..|...:..|:...
Zfish    79 SPTVGM--MLRTLWTAVYNHLVFVLPAVLITNMVMPMPPLPTV--APTV-WEMFSGGLGALLVFD 138

  Fly   260 GFYYSHRLLHHK--HIYKYIHKQHHEWTAPISVTAIYCHPIE----HIFSNLLPPFLGVFLMGSH 318
            ..|:...::|||  |:|:::|..||::.:|.|.:..:...:|    ..:||:.|     .|:..|
Zfish   139 TQYFLWHMVHHKNPHLYRWVHAIHHDYISPFSWSTQHLSGVELMTVGFWSNIDP-----ILLKCH 198

  Fly   319 VATAWLWFALAILSTLNAHSGYHLPFFP----------SPEAHDFHHLKFNNCFG-VLGVLDRLH 372
            ..|.|.....:|..::..|.||.|||.|          ...|||.||.|.::.|. .....|::.
Zfish   199 PLTVWTLTVYSIWMSVEDHIGYDLPFSPGHLVPFGLLGGAMAHDMHHQKPSSNFAPFFSHWDKIF 263

  Fly   373 GTDSLFRATK 382
            ||....:.|:
Zfish   264 GTAITVKLTQ 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1998NP_572887.1 FA_hydroxylase 250..374 CDD:397991 36/140 (26%)
ch25hl1.1NP_001017865.1 FA_hydroxylase 131..265 CDD:397991 36/138 (26%)
Histidine box-1 144..148 0/3 (0%)
Histidine box-2 159..163 1/3 (33%)
Histidine box-3 240..246 4/5 (80%)

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