DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1998 and sur2

DIOPT Version :10

Sequence 1:NP_572887.1 Gene:CG1998 / 32300 FlyBaseID:FBgn0030485 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_596489.1 Gene:sur2 / 2541225 PomBaseID:SPBC887.15C Length:293 Species:Schizosaccharomyces pombe


Alignment Length:248 Identity:56/248 - (22%)
Similarity:99/248 - (39%) Gaps:47/248 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 EPMVLW--VFGTTIFTMLVYWTVGTLYTFMDLTNRPACLRKYKIQPGTNEPVEVRR--------- 202
            |.:..|  |..:.:..:::||.....:.|:.....|. ..||:|.|    |.|:.|         
pombe     6 EMLTTWNPVTVSLVSPVIIYWVASAFFGFLHYIELPV-FEKYRIHP----PEEIARRNRVPQMAV 65

  Fly   203 LLKVIWCVVCNQIFVGIPLA-----------------YASYRLMEIRGLSDIRDLP---TFHWV- 246
            :..|::..:| ::.|||.||                 |.::....:..|..:....   .:::: 
pombe    66 VKAVLFQQLC-EVVVGIALAMFEGYPEPIDEAKQMLRYEAFFSKNLPALLQVAPFAPKLAYNFIV 129

  Fly   247 -CFELTVCILMEELGFYYSHRLLHH-KHIYKYIHKQHHEWTAPISVTAIYCHPIEHIFSNLLPPF 309
             .|:......:.:...|:.||.||: |.:|..||..||....|.::.|:|.||.|.:..:.....
pombe   130 PAFQYFFAFFIIDSWQYFWHRYLHYNKKLYNMIHAHHHRLQVPYAMGALYNHPFEGLILDTFGAG 194

  Fly   310 LGVFLMGSHVATAWLWFALAILSTLNAHSGYHLPFFP-------SPEAHDFHH 355
            :.....|.....|.::|.|:.|.|::.|.||..|:.|       :...||.||
pombe   195 VAYLAAGLSPQQAVIFFTLSTLKTVDDHCGYVFPYDPLQMFFANNARYHDLHH 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1998NP_572887.1 FA_hydroxylase 250..374 CDD:397991 32/114 (28%)
sur2NP_596489.1 FA_hydroxylase 135..270 CDD:397991 32/113 (28%)

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