DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstT4 and Mars1

DIOPT Version :9

Sequence 1:NP_572886.2 Gene:GstT4 / 32299 FlyBaseID:FBgn0030484 Length:237 Species:Drosophila melanogaster
Sequence 2:XP_006241513.1 Gene:Mars1 / 299851 RGDID:1305321 Length:910 Species:Rattus norvegicus


Alignment Length:158 Identity:39/158 - (24%)
Similarity:57/158 - (36%) Gaps:46/158 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SRALYILLEASKIPFEAIPISMLKGEHLTGEFR------DNVNRFRKLPAITDHGYQLSENV--- 71
            |.|||.|:...|           |||.:.|..|      |:....:..|.:......|::.|   
  Rat    97 SAALYCLVVQGK-----------KGEDVLGPLRRVLTHIDHSLSRQNCPFLAGDTESLADIVLWG 150

  Fly    72 AIFRHLAREKLVPEH------WYPRRHLGRSRIDEYLAWQQTNMGVATTEYFQQKWLV--PYLQK 128
            |::..|.....:||.      |:           :.|:.|:.....|.|...||..|.  |||||
  Rat   151 ALYPLLQDPAYLPEELGALQSWF-----------QTLSTQEPCQRAAETV
LKQQGVLALRPYLQK 204

  Fly   129 ------TRPADNAVNLASKQLE-HTLNE 149
                  ..|...||:...::.| .||:|
  Rat   205 QPQPQPLPPEGRAVSNEPEEEELATLSE 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT4NP_572886.2 GST_N_Theta 5..80 CDD:239348 17/72 (24%)
GST_C_Theta 95..220 CDD:198292 19/64 (30%)
Mars1XP_006241513.1 Thioredoxin_like 1..68 CDD:294274
GstA <47..189 CDD:223698 23/113 (20%)
GST_C_MetRS_N 77..179 CDD:198340 21/103 (20%)
PRK12268 266..821 CDD:237029
MetRS_core 267..635 CDD:173907
Anticodon_Ia_Met 644..773 CDD:153411
MetRS_RNA 855..899 CDD:238475
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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