DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment GstT4 and gst-15

DIOPT Version :9

Sequence 1:	NP_572886.2	Gene:	GstT4 / 32299	FlyBaseID:	FBgn0030484	Length:	237	Species:	Drosophila melanogaster
Sequence 2:	NP_496860.1	Gene:	gst-15 / 185410	WormBaseID:	WBGene00001763	Length:	213	Species:	Caenorhabditis elegans

Alignment Length:	177	Identity:	39/177 - (22%)
Similarity:	77/177 - (43%)	Gaps:	34/177 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 YFDFLN--QSSRALYILLEASKIPFEAIPISMLKGEHLTGEFRDNVNRFRKLPAITDHGYQLSEN 70
            |||...  :.:|.|:.|   |..|::.|.|.|...|....:.||. ..|.:||.:...|:.:.::
Worm     8 YFDLRGWAEPARQLFHL---SHTPYDDIRIPMADTEGKWEKMRDK-TPFGQLPVLNVDGFDIPQS 68

  Fly    71 VAIFRHLAREKLVPEHWYPRRHLGRSRIDEYLAWQQTNMGVATTEYFQQ-----KWLVPYLQKTR 130
            .||.|:||::         ..:.|::..:|  ||..     |..:.|:.     |.|:...:..:
Worm    69 AAICRYLAKK---------FGYAGKTPEEE--AWAD-----AVVDQFKDFSVAFKTLLFATRAGK 117

  Fly   131 PADNAVNLASKQLEHTLNEFEQLFLN------SRKFMMGDNISYADL 171
            |.:..:.: ..::.:...:...:.||      ...:::||.:::|||
Worm   118 PEEEILKI-RYEIFNPARDVYFILLNRILKKSKSGYLVGDGLTWADL 163

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
GstT4	NP_572886.2	GST_N_Theta	5..80	CDD:239348	23/73 (32%)
GstT4	NP_572886.2	GST_C_Theta	95..220	CDD:198292	15/88 (17%)
gst-15	NP_496860.1	GST_N_Sigma_like	4..77	CDD:239337	22/72 (31%)
		PTZ00057	6..211	CDD:173353	39/177 (22%)
		GST_C_Sigma_like	87..195	CDD:198301	15/85 (18%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1231780at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X30
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010