DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstT4 and gst-24

DIOPT Version :9

Sequence 1:NP_572886.2 Gene:GstT4 / 32299 FlyBaseID:FBgn0030484 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_496859.1 Gene:gst-24 / 185407 WormBaseID:WBGene00001772 Length:209 Species:Caenorhabditis elegans


Alignment Length:224 Identity:52/224 - (23%)
Similarity:94/224 - (41%) Gaps:38/224 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQPLKFYFDFLN--QSSRALYILLEASKIPFEAIPISMLKGEHLTGEFRDNVNRFRKLPAITDH 63
            |.|...:||:...  :.:|.|:.|   :.:.||.:.|.  .|....|..:.. ..|.:||.::..
 Worm     1 MPQYKLYYFNLRGWAEPARQLFKL---AHVEFEDVRIE--NGTPEWGALKPK-TPFGQLPFLSVD 59

  Fly    64 GYQLSENVAIFRHLAREKLVPEHWYPRRHLGRSRIDEYLAWQQTNMGVATTEYFQQKWLVPYLQ- 127
            |:::.::.||.|:||::         ..:.|::..:|  ||..     |..:.|:. ::.|..| 
 Worm    60 GFEIPQSAAILRYLAKK---------FGYAGKTSEEE--AWVD-----AIVDQFKD-FVTPLRQL 107

  Fly   128 -KTRPADNAVNLASKQLE------HTLNEFEQLFLNSRK--FMMGDNISYADLSAICEIDQPKSI 183
             ..:.:.||..:...|.|      .|..:.....|...|  |::||.:::|||.....:...:.:
 Worm   108 IMAQRSGNAEEIERIQKEVFAPARDTFFKILNGILEKSKSGFLVGDGVTWADLVIADILTTMEML 172

  Fly   184 G-YNAFQNRNKLARWYETVREELGPHYKE 211
            | ::......|||...|.|.|.  |..||
 Worm   173 GVFDKHGEEQKLAALREKVNEI--PEIKE 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstT4NP_572886.2 GST_N_Theta 5..80 CDD:239348 19/76 (25%)
GST_C_Theta 95..220 CDD:198292 30/128 (23%)
gst-24NP_496859.1 GST_N_Sigma_like 4..75 CDD:239337 18/76 (24%)
PTZ00057 6..208 CDD:173353 50/219 (23%)
GST_C_Sigma_like 85..191 CDD:198301 25/113 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1231780at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X30
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.