DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1662 and AT1G52870

DIOPT Version :10

Sequence 1:NP_572883.1 Gene:CG1662 / 32296 FlyBaseID:FBgn0030481 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_564615.3 Gene:AT1G52870 / 841720 AraportID:AT1G52870 Length:366 Species:Arabidopsis thaliana


Alignment Length:264 Identity:63/264 - (23%)
Similarity:110/264 - (41%) Gaps:48/264 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GQRSLRMSWPRNSSATGGAGG----------------------AAPGGGSSTTTSTI------GF 56
            ||.||. .:|.:||:....|.                      .|.|..:.|...||      |:
plant    93 GQLSLE-GFPSSSSSGADLGDEKRRENEEMEKMIDRTINATIVLAAGSYAITKLLTIDHDYWHGW 156

  Fly    57 GALQKLR-----EW--HASAFSSRFLLFTNVGISLTLSCVGDVLEQHLEIYCG----EIERFEST 110
            ...:.||     .|  :..|.....:|...| ||..:..|||.:.|   .|.|    ||:|   .
plant   157 TLFEILRYAPQHNWIAYEEALKQNPVLAKMV-ISGVVYSVGDWIAQ---CYEGKPLFEIDR---A 214

  Fly   111 RTAHMAISGVTV-GVICHYWYKMLDKRMPGRTMRVVAKKIVLDQLICSPIYISAFFVTLGLLEQK 174
            ||....:.|.|: |.:.|::|:..::..|.:...||..|:..||.:.|.|:.|.:|..||.|..:
plant   215 RTLRSGLVGFTLHGSLSHFYYQFCEELFPFQDWWVVPVKVAFDQTVWSAIWNSIYFTVLGFLRFE 279

  Fly   175 TKHEVWEEIKEKAWKLYAAEWTVWPVAQFVNFYWIPTHYRIFYDNIISLGYDVLTSKVKHKQSHS 239
            :...:::|:|.....:..|.|.:||.|..:.:..:|...|:.:.:.:.|.:..:.|...:::|.:
plant   280 SPISIFKELKATFLPMLTAGWKLWPFAHLITYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEA 344

  Fly   240 HLKK 243
            .:.:
plant   345 RISE 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1662NP_572883.1 Mpv17_PMP22 169..230 CDD:461182 12/60 (20%)
AT1G52870NP_564615.3 Mpv17_PMP22 274..335 CDD:461182 12/60 (20%)

Return to query results.
Submit another query.