DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1662 and AT2G42770

DIOPT Version :9

Sequence 1:NP_001285209.1 Gene:CG1662 / 32296 FlyBaseID:FBgn0030481 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_565983.1 Gene:AT2G42770 / 818877 AraportID:AT2G42770 Length:232 Species:Arabidopsis thaliana


Alignment Length:259 Identity:56/259 - (21%)
Similarity:94/259 - (36%) Gaps:51/259 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQSLRGCPARGLILSRAIRGQRSLRMSWPRNSSATGGAGGAAPGGGS-STTTSTIGFGALQKLRE 64
            |.:|.||...|.........||       |...::|..|.....|.| |...|....|....|::
plant     1 MDALGGCGGAGGFWGWNGFDQR-------RKKKSSGDRGKKRNSGSSDSVDVSRDAGGYRFPLKQ 58

  Fly    65 WHASAFSSRFLLFTNVGISLTLSCVGDVLEQ--------------HLEIYCGEI----ERFESTR 111
                |.::..|.||           ||.:.|              ..|:..||:    ...:..|
plant    59 ----AVTAGALTFT-----------GDTIAQLSGRWKKRTALKQSSSELDEGELWNIFSEHDWIR 108

  Fly   112 TAHMAISG-VTVGVICHYWYKMLDKRMPGRTMRVVAKKIVLDQLICSPIYISAFF----VTLGLL 171
            ...|:..| :..|...:.||:.||..:|..|...:..|::|:|:|..|..|:..|    :.||.|
plant   109 ALRMSSYGFLLYGPGSYAWYQFLDHSLPKPTATNLVLKVLLNQVILGPSVIAVIFAWNNLWLGKL 173

  Fly   172 EQKTKHEVWEEIKEKAWKLYAAEWTVWPVAQFVNFYWIPTHYRIFYDNIISLGYDVLTSKVKHK 235
            .     |:..:.::.|.......:..|.....:||:.:|...|:.:.::.|:.::...|....|
plant   174 S-----ELGNKYQKDALPTLLYGFRFWVPVSILNFWVVPLQARVAFMSMGSVFWNFYLSSTMSK 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1662NP_001285209.1 Mpv17_PMP22 170..234 CDD:282035 10/63 (16%)
AT2G42770NP_565983.1 Mpv17_PMP22 173..227 CDD:397992 9/58 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1944
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1324608at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

Return to query results.
Submit another query.