DRSC/TRiP Functional Genomics Resources

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Protein Alignment Yippee and AT5G53940

DIOPT Version :9

Sequence 1:NP_572882.1 Gene:Yippee / 32295 FlyBaseID:FBgn0026749 Length:121 Species:Drosophila melanogaster
Sequence 2:NP_200205.1 Gene:AT5G53940 / 835477 AraportID:AT5G53940 Length:129 Species:Arabidopsis thaliana


Alignment Length:121 Identity:50/121 - (41%)
Similarity:70/121 - (57%) Gaps:1/121 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRIFLEHLGGLKLFNCAQCHTNLTNRSQLISTRFTGATGRAYLFKRVVNLTFSNIQERVMLTGR 65
            |||||...|.| :.:.|..|.|:|.....|:|..|....|:||||.|.||::...::||:||:|.
plant     1 MGRIFTVELEG-RSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLMLSGM 64

  Fly    66 HMVRDVMCKNCGAKLGWMYEFATEESQKYKEGRVILEYALITEAEGFPSEAATTSH 121
            |.|.|:.|..||..:||.||.|.|::||||||:.:||...|.:.....:|....:|
plant    65 HTVADIFCCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIVDEIDLSTEVYIDTH 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YippeeNP_572882.1 RLR_C_like 15..107 CDD:416942 40/91 (44%)
AT5G53940NP_200205.1 RLR_C_like 14..105 CDD:416942 40/90 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3399
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53853
OrthoDB 1 1.010 - - D1431042at2759
OrthoFinder 1 1.000 - - FOG0000384
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100480
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.730

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