DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ype and B0546.4

DIOPT Version :10

Sequence 1:NP_572882.1 Gene:Ype / 32295 FlyBaseID:FBgn0288857 Length:121 Species:Drosophila melanogaster
Sequence 2:NP_500335.1 Gene:B0546.4 / 177105 WormBaseID:WBGene00015251 Length:161 Species:Caenorhabditis elegans


Alignment Length:112 Identity:54/112 - (48%)
Similarity:64/112 - (57%) Gaps:1/112 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRIFLEHLGGL-KLFNCAQCHTNLTNRSQLISTRFTGATGRAYLFKRVVNLTFSNIQERVMLTG 64
            |||.|....|.. .|:.|..|:|.||...:|.|..|||:||.|.||||..|:.:...:.|.|.||
 Worm     1 MGRQFAGICGARGSLYGCVVCNTYLTCSKELTSKAFTGSTGPATLFKRAWNVVYGRCEHRKMTTG 65

  Fly    65 RHMVRDVMCKNCGAKLGWMYEFATEESQKYKEGRVILEYALITEAEG 111
            .|.||||.|..|..|||||||.|..|||.|||.:||:|.|...:..|
 Worm    66 WHTVRDVFCVTCNQKLGWMYEMAVSESQTYKETQVIIENANFEKIAG 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YpeNP_572882.1 RLR_C_like 14..107 CDD:472430 48/92 (52%)
B0546.4NP_500335.1 Yippee-Mis18 14..109 CDD:427204 48/94 (51%)

Return to query results.
Submit another query.