DRSC/TRiP Functional Genomics Resources

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Protein Alignment Yippee and Ypel1

DIOPT Version :9

Sequence 1:NP_572882.1 Gene:Yippee / 32295 FlyBaseID:FBgn0026749 Length:121 Species:Drosophila melanogaster
Sequence 2:XP_006521738.1 Gene:Ypel1 / 106369 MGIID:1913303 Length:217 Species:Mus musculus


Alignment Length:80 Identity:36/80 - (45%)
Similarity:48/80 - (60%) Gaps:2/80 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FLEHLGGLKLFNCAQCHTNLTNRSQLISTRFTGATGRAYLFKRVVNLTFSNIQERVMLTGRHMVR 69
            :|.|..  :.::|..|..:|.|..:|||..|.|:.||||||..|||:.....:|||:|||.|.|.
Mouse   100 YLPHCH--RTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVA 162

  Fly    70 DVMCKNCGAKLGWMY 84
            |:.|:||...|||.|
Mouse   163 DIYCENCKTTLGWKY 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YippeeNP_572882.1 RLR_C_like 15..107 CDD:416942 34/70 (49%)
Ypel1XP_006521738.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3399
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53853
OrthoDB 1 1.010 - - D1431042at2759
OrthoFinder 1 1.000 - - FOG0000384
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100480
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2192
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.760

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