DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1640 and gpt

DIOPT Version :9

Sequence 1:NP_727696.2 Gene:CG1640 / 32292 FlyBaseID:FBgn0030478 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_017213488.1 Gene:gpt / 403086 ZFINID:ZDB-GENE-050302-11 Length:549 Species:Danio rerio


Alignment Length:492 Identity:277/492 - (56%)
Similarity:360/492 - (73%) Gaps:1/492 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 VRRSFSTSHKMPSSSKALTLDNINPNFIAMEYAVRGPLVIRAGEIEKELEKGVKKPFDQVIRANI 148
            :::..|.:..:|...|.||:|.:|.|...::||||||:|.||.:|||||::|||||||:||:|||
Zfish    57 MQQKMSENGAIPRQGKVLTVDTMNANVKKVDYAVRGPIVQRAVQIEKELKEGVKKPFDEVIKANI 121

  Fly   149 GDCHAMGQQPLTFLRQLLALTFETRLLDSPDYPEDVKKRACAILNGCQGQSVGSYTDSAGLEVVR 213
            ||.|||||:|:||.||::||....:|||...:|||.|.||..||..|.|.|:|:||.|.|::.||
Zfish   122 GDAHAMGQRPITFFRQVMALCTYPQLLDDNKFPEDAKNRARRILQSCGGNSIGAYTTSQGIDCVR 186

  Fly   214 RQVAQYIEKRDGGIASNWQDIYLTGGASPGIKSILSMINAEVGCKAPGVMVPIPQYPLYSATISE 278
            :.||:|||:|||||.|:..:||||.|||.||.:||.::.|..|....|||:.|||||||||:|:|
Zfish   187 QDVAKYIERRDGGIPSDPDNIYLTTGASDGIVTILKLLTAGEGLTRTGVMISIPQYPLYSASIAE 251

  Fly   279 YGMTKVDYYLEEETGWSLDRKELQRSYDEAKKVCNPRALVVINPGNPTGQVLTRENIEEIIKFAH 343
            .|..:::|||.||..||||..|||||...|:|.||||.|.:||||||||||.:|:.||::|:||.
Zfish   252 LGAVQINYYLNEEKCWSLDISELQRSLQAARKHCNPRVLCIINPGNPTGQVQSRQCIEDVIQFAA 316

  Fly   344 DNKVLVLADEVYQDNVYDKNSKFWSFKKVAYEMGDPY-RNLEMVSFLSTSKGYLGECGIRGGYME 407
            ...:.::||||||||||.|..:|.|||||.:|||..| :.:|:.||.||||.|:||||.||||||
Zfish   317 KENLFLMADEVYQDNVYAKGCEFHSFKKVLFEMGPEYSKKVELASFHSTSKCYMGECGFRGGYME 381

  Fly   408 VLNLDPKVKAMLTKSITAALCSTTAGQVAVSALVNPPQPGEPSYDLYKKERDGILAALKERAELV 472
            |:|:|..|||.|||.::..||....||..:..:||||||||||:..:.:||..:|:||.|:|:|.
Zfish   382 VINMDADVKAQLTKLVSVRLCPPAPGQALMDLVVNPPQPGEPSHQTFMQERTAVLSALAEKAKLT 446

  Fly   473 HKALNSFEGYKVNPVQGAMYVFPQIEIPPKAIEAAKAKGMAPDVFYAFELLETSGICIVPGSGFG 537
            .:.||:..|...||||||||.||:|.:|.:||..|||||.|||:||..:|||.:|||:|||||||
Zfish   447 EQILNTVPGISCNPVQGAMYSFPRITLPERAISEAKAKGQAPDMFYCMKLLEETGICLVPGSGFG 511

  Fly   538 QKPGTWHFRSTILPQTDKLKLMMEKFRVFHAEFMKKY 574
            |:.||:|||.||||.|||||||:.|.:.||..|.::|
Zfish   512 QREGTYHFRMTILPPTDKLKLMLNKLKDFHQRFTQQY 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1640NP_727696.2 PTZ00377 99..575 CDD:240391 275/477 (58%)
AAT_like 178..564 CDD:99734 222/386 (58%)
gptXP_017213488.1 PTZ00377 70..549 CDD:240391 275/479 (57%)
AAT_like 176..528 CDD:99734 202/351 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594088
Domainoid 1 1.000 420 1.000 Domainoid score I617
eggNOG 1 0.900 - - E1_COG0436
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 574 1.000 Inparanoid score I1012
OMA 1 1.010 - - QHG61488
OrthoDB 1 1.010 - - D365656at33208
OrthoFinder 1 1.000 - - FOG0001270
OrthoInspector 1 1.000 - - otm25088
orthoMCL 1 0.900 - - OOG6_100524
Panther 1 1.100 - - LDO PTHR11751
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R36
SonicParanoid 1 1.000 - - X707
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.840

Return to query results.
Submit another query.