DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1640 and Tat

DIOPT Version :10

Sequence 1:NP_727696.2 Gene:CG1640 / 32292 FlyBaseID:FBgn0030478 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_036800.1 Gene:Tat / 24813 RGDID:3820 Length:454 Species:Rattus norvegicus


Alignment Length:499 Identity:122/499 - (24%)
Similarity:196/499 - (39%) Gaps:131/499 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 DVRRSFSTSHKMPSSSKALTLDN--INPNFIAMEYAVRGPLVIRAGEIEKELEKGVKKPFDQVIR 145
            |||.| ..|:|..:..:|: :||  :.||                             |...||.
  Rat    42 DVRPS-DMSNKTFNPIRAI-VDNMKVQPN-----------------------------PNKTVIS 75

  Fly   146 ANIGDCHAMGQQPLTFLRQLLALTFETRLLDSPDYPEDVKKRACAILNGCQGQSVGSYTDSAGLE 210
            .:|||....|..|..                    ||..:....|:.:|    ....|..|.|..
  Rat    76 LSIGDPTVFGNLPTD--------------------PEVTQAMKDALDSG----KYNGYAPSIGYL 116

  Fly   211 VVRRQVAQYIEKRDGGIASNWQDIYLTGGASPGIKSILSMINAEVGCKAPG--VMVPIPQYPLYS 273
            ..|.:||.|....:..:.:  :|:.||.|.|..|:..|:::      ..||  :::|.|.:.||.
  Rat   117 SSREEVASYYHCHEAPLEA--KDVILTSGCSQAIELCLAVL------ANPGQNILIPRPGFSLYR 173

  Fly   274 ATISEYGMTKVDYYLEEETGWSLDRKELQRSYDEAKKVCNPRALVVINPGNPTGQVLTRENIEEI 338
            ......|:....|.|..|..|.:|.|:|:...|| |..|    |||.||.||.|.|.::.::::|
  Rat   174 TLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDE-KTAC----LVVNNPSNPCGSVFSKRHLQKI 233

  Fly   339 IKFAHDNKVLVLADEVYQDNVYDKNSKFWSFKKVAYE-MGDPYRNLEMVSFLSTSKGYLGECGIR 402
            :..|....|.:||||:|.|.|         |....|| :.:...|:.::|....:|.:|.. |.|
  Rat   234 LAVAERQCVPILADEIYGDMV---------FSDCKYEPLANLSTNVPILSCGGLAKRWLVP-GWR 288

  Fly   403 GGYMEVLN----LDPKVKAMLTKSITAALCSTTAGQVAVSALVNPPQPGEPSYDLYKKERDGILA 463
            .|::.:.:    ...:::..|.|.....|...|..|.|:.:::. ..|.|..:|        .|:
  Rat   289 LGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILQ-RTPQEFYHD--------TLS 344

  Fly   464 ALKERAELVHKALNSFEGYKVNPVQ--GAMYV--------FPQIEIPPKAIEAAKAKGMAPDVFY 518
            .||..|:|.:.||.:..|  :.||:  ||||:        ||:.|               .||.:
  Rat   345 FLKSNADLCYGALAAIPG--LQPVRPSGAMYLMVGIEMEHFPEFE---------------NDVEF 392

  Fly   519 AFELLETSGICIVPGSGFGQKPGTWHFRSTI-LPQTDKLKLMME 561
            ...|:....:..:|.:.| :.|.  .||..| :|:.    :|:|
  Rat   393 TERLIAEQAVHCLPATCF-EYPN--FFRVVITVPEV----MMLE 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1640NP_727696.2 PTZ00377 99..575 CDD:240391 116/483 (24%)
TatNP_036800.1 TAT_ubiq 1..40 CDD:462236
tyr_amTase_E 41..442 CDD:273529 122/499 (24%)
Blue background indicates that the domain is not in the aligned region.

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