DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1640 and T04F3.1

DIOPT Version :9

Sequence 1:NP_727696.2 Gene:CG1640 / 32292 FlyBaseID:FBgn0030478 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001256363.1 Gene:T04F3.1 / 179608 WormBaseID:WBGene00011436 Length:3460 Species:Caenorhabditis elegans


Alignment Length:543 Identity:108/543 - (19%)
Similarity:193/543 - (35%) Gaps:146/543 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 FIQPLDVRRSFSTSHKMPSSSKALTL---DNINPNFIAMEY-AVRGP---LVIRAGEIEKELEK- 134
            |::| .|.:|.|:::...|.:|:.|.   :.:....|..|| .::|.   |:.::..:.|.|:| 
 Worm  2932 FVEP-SVSKSDSSANIKASQNKSTTKPCDEELLEIEIKSEYFLIKGSYSLLIPKSDPLGKMLQKL 2995

  Fly   135 ----------------GVKKPFDQVIRANIG--DCHAMGQQ------------------PLTFLR 163
                            .:||.....||...|  |..:|..|                  ..|||:
 Worm  2996 REQNDSLATLDFSLTRKLKKLLVNCIREKAGSLDMVSMSSQYEGLSSRGQSLIESIDHASATFLK 3060

  Fly   164 QLLALTFETRLLDSPDYPEDVKKRACAILNGCQGQS-----------------------VGSYTD 205
            ..:.....||   :|:          .::|.|..::                       :..|..
 Worm  3061 MNVDKYEPTR---NPN----------GVVNFCTAENNICTPLLEDRFKHLELFFPNIEHLVRYPP 3112

  Fly   206 SAGLEVVRRQVAQYIEKRDG-GIASNWQDIYLTGGASPGIKSILSMINAEVGCKAPGVMVPIPQY 269
            :.|....||.:.:|.::..| |:..:  ::.||.....|. .:.|.      |......:.:...
 Worm  3113 AGGWPETRRVLVKYFKEFMGAGVTID--ELVLTASTRTGY-DVTSY------CLFEQDDILLTNG 3168

  Fly   270 PLYSATIS---EYGMTKVDYYLEEETGWSLDRK----ELQRSYDEAKKVCNPRALVVINPGNPTG 327
            |:|:.|||   |....:|.....:.:...||.|    ||.|.......|   ..::::||.||.|
 Worm  3169 PIYTGTISNVQEKAQCQVVCVETDLSNPRLDVKMYEAELNRQIALENTV---SGVIIVNPHNPLG 3230

  Fly   328 QVLTRENIEEIIKFAHDNKVLVLADEVYQDNVYDK-NSKFWSFKKVAYEMGDPYRNLEMVSFL-S 390
            .....|.:..:..:|....:.|:.|||:.::|:|| ||||..|....:.:..|    :.|::| |
 Worm  3231 VTFPPEQVISLCNWASSKNLRVVIDEVFANSVFDKLNSKFRPFLSYRHRLHRP----DSVAWLWS 3291

  Fly   391 TSKGYLGECGIRGGYMEVLNLDPKVKAMLTKSITAALCSTTAGQVAVSALVNPPQPGEPSYDLYK 455
            .||.: |..|::...:...|  ..:....||......||......||:.|.:...          
 Worm  3292 VSKDF-GLPGLKFAVIHTTN--EGLCQAATKLQMYYPCSPFVQDFAVNLLSDSEW---------- 3343

  Fly   456 KERDGILAALKERAELVHKALNSFEGYKVN----------PVQGAMYVFPQIEIPPKAIEAAKAK 510
                     |:|....|:|.::....|..:          |.|..::||........::::....
 Worm  3344 ---------LREFHREVNKRISIHYRYTSDNLKRLEIPFIPAQAGIFVFADFSKHLTSLDSVGEL 3399

  Fly   511 GMAPDVFYAFELLETSGICIVPG 533
            .:       ||.|..:|:.:.||
 Worm  3400 AL-------FERLAEAGVMLTPG 3415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1640NP_727696.2 PTZ00377 99..575 CDD:240391 102/522 (20%)
AAT_like 178..564 CDD:99734 79/399 (20%)
T04F3.1NP_001256363.1 PTZ00121 <1134..1515 CDD:173412
SMC_N 1346..2197 CDD:308206
AAT_like 3076..3444 CDD:99734 78/385 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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