DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt11E and Dmrtc1a

DIOPT Version :10

Sequence 1:NP_511146.2 Gene:dmrt11E / 32291 FlyBaseID:FBgn0030477 Length:377 Species:Drosophila melanogaster
Sequence 2:XP_006528343.1 Gene:Dmrtc1a / 70887 MGIID:1918137 Length:227 Species:Mus musculus


Alignment Length:221 Identity:50/221 - (22%)
Similarity:79/221 - (35%) Gaps:44/221 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 QLVVDRQRVMAAQVALRRQQTMEALEATASSTKSTGVTTASANNSSSSEGEDSLSSTSPPPAHSH 216
            :||...:|.|||...........|:|....:.|:| |....|...::::.|   ||..|...:.|
Mouse    31 RLVERHKRTMAAAHPSHMHVKKLAVEEGVRTGKNT-VQQIQAQVDTATQEE---SSQGPVLLNQH 91

  Fly   217 PHSHSHPTSCVSNSSSSSATRQALMAQKRIYKQRLRSLQQSTLHITAAMEEYKQRFPTFSSPLME 281
            |.:.|.|                 ...:.:.:|.:.||.... |.|:||       |:....|  
Mouse    92 PETTSVP-----------------YTPETVGQQLMVSLPGEP-HGTSAM-------PSMCPSL-- 129

  Fly   282 RMRKRRAFADPELNHVMEATLGGNALYFATVAA---------AAAACAPVHQEQHIYHPMPPTIP 337
             :.:..|..||.|  :....:|.:|...|:|:|         ||.|...:.......| .|..:|
Mouse   130 -ILQPCATTDPML--LQPQVMGPSASNQASVSATLEWQEMLEAAEALLALKNSSQTRH-QPCGMP 190

  Fly   338 LTIPPTNPAMTTPAVTTASTGSGKKP 363
            .|.......:..|::....|.||..|
Mouse   191 GTAGERGLQLANPSMPPRPTSSGSLP 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt11ENP_511146.2 DM 118..164 CDD:459924 5/11 (45%)
Dmrtc1aXP_006528343.1 DMRT-like 112..226 CDD:464871 28/119 (24%)

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