DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dmrt11E and dmrta2

DIOPT Version :10

Sequence 1:NP_511146.2 Gene:dmrt11E / 32291 FlyBaseID:FBgn0030477 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001007065.2 Gene:dmrta2 / 474350 ZFINID:ZDB-GENE-041116-2 Length:440 Species:Danio rerio


Alignment Length:364 Identity:96/364 - (26%)
Similarity:130/364 - (35%) Gaps:132/364 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 RTPKCARCRNHGVISCVKGHKRLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEA---- 178
            |||||||||||||:|.:|||||.|||::|.|..|.|:.:|||||||||||||||..|..||    
Zfish    55 RTPKCARCRNHGVVSALKGHKRYCRWKDCMCAKCTLIAERQRVMAAQVALRRQQAQEENEARELQ 119

  Fly   179 ----TASSTKSTGVTTASAN---------------NSSSSEGEDSLSS----------------- 207
                ||.     |:..|:||               ::.|:.||.::..                 
Zfish   120 LLYGTAE-----GLALAAANGIIPPRQNYEVFGPVSNESNSGESNIQKFELFPKTPLPGTVTPHQ 179

  Fly   208 ----------------TSPPPAHSHPHSHSHPTSCVSN--------------------------- 229
                            :||...|.....:....|.||:                           
Zfish   180 AAGKSVSTDTESVPGMSSPDMRHGSGSENGDRESIVSSPIAKPLKDGEETPGSISPIGSDSGSDT 244

  Fly   230 -------SSSSSATRQ--ALMAQKRIYKQRLRSLQQSTLH-----ITAAMEEYKQRFPTFSSP-- 278
                   |.||:|:||  |:....|::....||:.:..|.     :..|:|:..........|  
Zfish   245 DKDEQEPSPSSAASRQMNAIDILTRVFPNHKRSVLELVLQGCGKDVVQAIEQILNNSGQAKGPEE 309

  Fly   279 --LMERMRKRRAFADPELNHVMEATLGGNALYFATVAAAAAACAPVHQEQHIYHPMPPTIPL-TI 340
              ..|||.:.   ..|.::......|.|     ....:..:|.:|:......:...|.|.|| |.
Zfish   310 TWTAERMLQS---VQPTMSSTPRPMLPG-----TMTLSNRSAFSPLQPNAPHFGSDPSTYPLSTH 366

  Fly   341 PPTNP------------AMTTPAVTTASTGSGKKPKLSF 367
            ...||            |...|..||     |..|.|.|
Zfish   367 LGLNPLRLAYSAHSRGLAFMAPYSTT-----GLMPTLGF 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt11ENP_511146.2 DM 118..164 CDD:459924 32/45 (71%)
dmrta2NP_001007065.2 DM 55..101 CDD:459924 32/45 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 167..261 11/93 (12%)
CUE_DMA_DMRTA2 259..300 CDD:270601 9/40 (23%)
DMRT5_DMB 340..426 CDD:466773 17/66 (26%)

Return to query results.
Submit another query.