DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dmrt11E and Dmrtb1

DIOPT Version :10

Sequence 1:NP_511146.2 Gene:dmrt11E / 32291 FlyBaseID:FBgn0030477 Length:377 Species:Drosophila melanogaster
Sequence 2:XP_063143794.1 Gene:Dmrtb1 / 313484 RGDID:1560921 Length:366 Species:Rattus norvegicus


Alignment Length:305 Identity:78/305 - (25%)
Similarity:104/305 - (34%) Gaps:95/305 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LLRTPKCARCRNHGVISCVKGHKRLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTME------ 174
            :||||||:||||||.:..||||...|||:.|.|..|.|:.:||::||||..|:.|.|.|      
  Rat     1 MLRTPKCSRCRNHGYLVPVKGHAGKCRWKHCICDKCYLITERQKIMAAQKVLKNQATEEQGATVG 65

  Fly   175 --------------ALEATASSTKSTGVTTASANNSSSSEG-----EDSLSSTSPPPAHSH--PH 218
                          |..|||||:....:..|:...:.....     |.|..:.||.|:...  |.
  Rat    66 TQGPQLPPRAPAPAAATATASSSSICPLPRAALGGAGPGPAATCFLERSPQARSPGPSAFQLVPS 130

  Fly   219 SHSHPTSCVSNSSSSSATRQ---ALMAQKRIYKQRL-----------------------RSLQQS 257
            ....|::....|..|.....   |.:.|.|....|.                       ..|:..
  Rat   131 GRPGPSTFQPGSGGSGGLHDRPPAWLPQLRPQAPRPELCCPDQHLPVRPVPRLPFADYGHPLRFK 195

  Fly   258 TLHITAA----MEEYKQ-----RFPTFSS-PLMERMRKRRAFADPE---LNHVMEATLGGNALYF 309
            :.|:..|    .|.:||     ..|.:.. ||.|......|...|:   ..||            
  Rat   196 SDHVVGAGYPEREPFKQCPACIPVPPYQPFPLSEGQDSSSALGVPQQRGFRHV------------ 248

  Fly   310 ATVAAAAAACAPVHQEQHIYHP---------MPPTIPLTIPPTNP 345
                    :|.|.|....:..|         .||..||..||..|
  Rat   249 --------SCGPYHGNSLVSEPARDLQPTYCSPPPPPLPPPPPQP 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt11ENP_511146.2 DM 118..164 CDD:459924 26/45 (58%)
Dmrtb1XP_063143794.1 None

Return to query results.
Submit another query.