DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt11E and Dmrta1

DIOPT Version :9

Sequence 1:NP_511146.2 Gene:dmrt11E / 32291 FlyBaseID:FBgn0030477 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001101415.1 Gene:Dmrta1 / 313352 RGDID:1309796 Length:488 Species:Rattus norvegicus


Alignment Length:115 Identity:57/115 - (49%)
Similarity:66/115 - (57%) Gaps:9/115 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 RTPKCARCRNHGVISCVKGHKRLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEATASS 182
            |||||||||||||:|.:|||||.||||:|.|..|.|:.:|||||||||||||||..|..||....
  Rat    80 RTPKCARCRNHGVVSALKGHKRFCRWRDCACAKCTLIAERQRVMAAQVALRRQQAQEESEARGLH 144

  Fly   183 ----TKSTGVTTASANNSSSSEGEDSLSSTSP-----PPAHSHPHSHSHP 223
                ...:|....::..|..:|....|||...     ..|..||.|.|.|
  Rat   145 RLLYQGPSGPGAPASGGSGRTESPQVLSSPMTVAALGAGASRHPGSRSVP 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt11ENP_511146.2 DM 118..164 CDD:279137 33/45 (73%)
Dmrta1NP_001101415.1 DM 80..126 CDD:279137 33/45 (73%)
DMA 313..348 CDD:281472
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3815
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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