DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt11E and Dmrta1

DIOPT Version :10

Sequence 1:NP_511146.2 Gene:dmrt11E / 32291 FlyBaseID:FBgn0030477 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001101415.1 Gene:Dmrta1 / 313352 RGDID:1309796 Length:488 Species:Rattus norvegicus


Alignment Length:115 Identity:57/115 - (49%)
Similarity:66/115 - (57%) Gaps:9/115 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 RTPKCARCRNHGVISCVKGHKRLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEATASS 182
            |||||||||||||:|.:|||||.||||:|.|..|.|:.:|||||||||||||||..|..||....
  Rat    80 RTPKCARCRNHGVVSALKGHKRFCRWRDCACAKCTLIAERQRVMAAQVALRRQQAQEESEARGLH 144

  Fly   183 ----TKSTGVTTASANNSSSSEGEDSLSSTSP-----PPAHSHPHSHSHP 223
                ...:|....::..|..:|....|||...     ..|..||.|.|.|
  Rat   145 RLLYQGPSGPGAPASGGSGRTESPQVLSSPMTVAALGAGASRHPGSRSVP 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt11ENP_511146.2 DM 118..164 CDD:459924 33/45 (73%)
Dmrta1NP_001101415.1 DM 80..126 CDD:459924 33/45 (73%)
DMA 312..347 CDD:460937
DMRT5_DMB 389..476 CDD:466773
Blue background indicates that the domain is not in the aligned region.

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