DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt11E and mab-23

DIOPT Version :10

Sequence 1:NP_511146.2 Gene:dmrt11E / 32291 FlyBaseID:FBgn0030477 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001041089.1 Gene:mab-23 / 266926 WormBaseID:WBGene00003114 Length:175 Species:Caenorhabditis elegans


Alignment Length:173 Identity:47/173 - (27%)
Similarity:75/173 - (43%) Gaps:25/173 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 PK----CARCRNHGVIS-CVKGHKRLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEAT 179
            ||    |..|.|||:.: ..||||:.|.:|.|.|..|.|...|:.:  .|:..:.:.|.|.:   
 Worm     2 PKEQYMCQLCANHGIFNQPKKGHKQKCPYRTCPCSLCALNTKRRAL--DQIERQLKHTNEPM--- 61

  Fly   180 ASSTKSTGVTTASANNSSSSEGEDSLSSTSPPPAHSHPHSHSHPTSCVSNSSSSSATRQALMAQK 244
                  ||.|   |.:.:|...|..||.|:|...   ||:.:.......||.|||.....:....
 Worm    62 ------TGQT---ATSMASPTPECPLSPTTPKMT---PHTPTSGKDTFRNSISSSNMAFTVQLPA 114

  Fly   245 RIYKQRLRSLQQSTLHITAAMEEYKQRFPTFSSPLMERMRKRR 287
            .|.|:.|:.|::....:..::|   :.||......:|.::|.:
 Worm   115 TITKKELKLLRRDDTPLQNSLE---RPFPRSIDEAIETIKKEK 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt11ENP_511146.2 DM 118..164 CDD:459924 18/48 (38%)
mab-23NP_001041089.1 DM 6..55 CDD:470614 17/50 (34%)

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