DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt11E and dmd-6

DIOPT Version :9

Sequence 1:NP_511146.2 Gene:dmrt11E / 32291 FlyBaseID:FBgn0030477 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001370045.1 Gene:dmd-6 / 178392 WormBaseID:WBGene00007058 Length:470 Species:Caenorhabditis elegans


Alignment Length:299 Identity:65/299 - (21%)
Similarity:109/299 - (36%) Gaps:66/299 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 CARCRNHGVISCVKGHKRLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEATASSTKST 186
            |.:|..||....:|.|...|.:..|.|.:|: .::.:|:.:..   :|.:....|.|..::.:..
 Worm    45 CRKCEGHGEKVILKNHSPQCPYILCNCKSCE-KLNYKRLKSFN---KRNKEKIELAAALNAKRHA 105

  Fly   187 GVTTASANNSSSSEGEDSL-SSTSPPPAHSHPHSHSHPTSCVSNSSSSSATRQALMAQK------ 244
            ..:.:|.::........|. |.||.|...|...:.|  |:.::.|:|:..|...|..:.      
 Worm   106 PESGSSVDDEEGFSRRSSFCSKTSTPDMDSETRTSS--TTPITRSNSTMPTANGLEGRSGSLGHM 168

  Fly   245 -----RIYKQRLRSLQQSTLHITAAMEEYKQRFPTF--SSPLMERMRKR-RAFADPELNHV---- 297
                 .|:|.:..|.::       .:||.:...|..  .||....|||| ..|..|...|.    
 Worm   169 TVMSYDIWKAKCASERK-------RLEEERLTKPELFTRSPSPGPMRKRAHTFVAPPTIHTPDIP 226

  Fly   298 --------MEATLGGNALYFATVAAAA-------AACAPVHQEQHIYHPMPPT------------ 335
                    ::..:.|..:...|:.|..       ....||.|.| :..|:..|            
 Worm   227 VVAAKKMSLDEKVKGKFITLPTIPAMRIFVNEEDEDVKPVTQMQ-LAQPIALTPSPQMSLASTLA 290

  Fly   336 -IPLTIPPTNPAMTTPA--VTTASTGSGKKPKLSFSIES 371
             ||::.|...|:|.||.  :...||.|   |.|.|.|.:
 Worm   291 QIPMSTPVCMPSMITPTSFLDIPSTSS---PMLPFQIST 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt11ENP_511146.2 DM 118..164 CDD:279137 11/41 (27%)
dmd-6NP_001370045.1 DM 41..94 CDD:214606 12/52 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12322
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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