DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt11E and mab-3

DIOPT Version :10

Sequence 1:NP_511146.2 Gene:dmrt11E / 32291 FlyBaseID:FBgn0030477 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001022464.1 Gene:mab-3 / 174533 WormBaseID:WBGene00003100 Length:290 Species:Caenorhabditis elegans


Alignment Length:212 Identity:61/212 - (28%)
Similarity:91/212 - (42%) Gaps:58/212 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 CGC-QCLNVRAPFHILLVDQQARMSKDASVRICQ-------RERRLLRTPKCARCRNHGVISCVK 135
            |.| :|         .:|:|:.:::...|.:...       |:.:.:|.|.||||..|||:..::
 Worm    52 CPCREC---------TMVEQRRQLNNLLSKKKIHCTPATQTRDGKRVRDPHCARCSAHGVLVPLR 107

  Fly   136 GHKR-LCRWRECCCPNCQLVVDRQRVMAAQVALRRQQ--------------------TMEALEAT 179
            |||| :|::..|.|..|.||..|:.:||||:.|||.|                    .||.:..|
 Worm   108 GHKRTMCQFVTCECTLCTLVEHRRNLMAAQIKLRRSQQKSRDGKEPKRNSRRKSKDMDMEMMVVT 172

  Fly   180 ASSTKSTGVTTASANNSSSSEGEDSLSSTSPPPAHSHPHSHSHPTSCVSNSSSSSATRQALMAQK 244
            |:..:....|:||.:.||:::......|.|||              | |.|...:.....|.|..
 Worm   173 ATDGQKIIGTSASPSPSSTTDTMSPSLSMSPP--------------C-SPSPLLAQYTLTLAAPI 222

  Fly   245 RIY-----KQRLRSLQQ 256
            .||     .|:|.||||
 Worm   223 PIYPPIPMNQQLISLQQ 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt11ENP_511146.2 DM 118..164 CDD:459924 22/46 (48%)
mab-3NP_001022464.1 DM 24..77 CDD:214606 6/33 (18%)
DM 90..144 CDD:214606 27/53 (51%)

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