DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt11E and Dmrt1

DIOPT Version :9

Sequence 1:NP_511146.2 Gene:dmrt11E / 32291 FlyBaseID:FBgn0030477 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_446158.1 Gene:Dmrt1 / 114498 RGDID:621640 Length:374 Species:Rattus norvegicus


Alignment Length:117 Identity:58/117 - (49%)
Similarity:65/117 - (55%) Gaps:15/117 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 RTPKCARCRNHGVISCVKGHKRLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEATASS 182
            |.||||||||||..|.:|||||.|.||:|.|..|.|:.:|||||||||||||||..|  |....|
  Rat    70 RLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCSLIAERQRVMAAQVALRRQQAQE--EELGIS 132

  Fly   183 ----TKSTGVTTASANNSSSSE--GEDSLSSTSPPPAHSHPHSHSHPTSCVS 228
                ..|.........||:|:.  ..:|.||..||||       |.||..||
  Rat   133 HPIPLPSAAELLVKRENSASNPCLMAESSSSAQPPPA-------STPTPTVS 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt11ENP_511146.2 DM 118..164 CDD:279137 30/45 (67%)
Dmrt1NP_446158.1 DM 70..116 CDD:279137 30/45 (67%)
Dmrt1 128..200 CDD:289167 17/57 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3815
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12322
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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