DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt11E and Dmrt1

DIOPT Version :10

Sequence 1:NP_511146.2 Gene:dmrt11E / 32291 FlyBaseID:FBgn0030477 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_446158.1 Gene:Dmrt1 / 114498 RGDID:621640 Length:374 Species:Rattus norvegicus


Alignment Length:117 Identity:58/117 - (49%)
Similarity:65/117 - (55%) Gaps:15/117 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 RTPKCARCRNHGVISCVKGHKRLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTMEALEATASS 182
            |.||||||||||..|.:|||||.|.||:|.|..|.|:.:|||||||||||||||..|  |....|
  Rat    70 RLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCSLIAERQRVMAAQVALRRQQAQE--EELGIS 132

  Fly   183 ----TKSTGVTTASANNSSSSE--GEDSLSSTSPPPAHSHPHSHSHPTSCVS 228
                ..|.........||:|:.  ..:|.||..||||       |.||..||
  Rat   133 HPIPLPSAAELLVKRENSASNPCLMAESSSSAQPPPA-------STPTPTVS 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt11ENP_511146.2 DM 118..164 CDD:459924 30/45 (67%)
Dmrt1NP_446158.1 DM 70..116 CDD:459924 30/45 (67%)
Dmrt1 128..200 CDD:463555 17/57 (30%)

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