DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt11E and dmrt3

DIOPT Version :9

Sequence 1:NP_511146.2 Gene:dmrt11E / 32291 FlyBaseID:FBgn0030477 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_001243149.1 Gene:dmrt3 / 100495546 XenbaseID:XB-GENE-995121 Length:449 Species:Xenopus tropicalis


Alignment Length:343 Identity:88/343 - (25%)
Similarity:125/343 - (36%) Gaps:120/343 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 ICQRERRLLRTPKCARCRNHGVISCVKGHKRLCRWRECCCPNCQLVVDRQRVMAAQVALRRQQTM 173
            :.|....|.|||||||||||||:|.:|||||.||:::|.|..|.|:::|||||||||||||||..
 Frog    15 VSQPRAPLQRTPKCARCRNHGVLSWLKGHKRYCRFKDCTCEKCILIIERQRVMAAQVALRRQQAN 79

  Fly   174 EALE--------ATASSTKSTGVTTA--------------------------------------- 191
            |:||        |....|.|....||                                       
 Frog    80 ESLESLIPDTLRAVPGLTSSLATDTAQQPGRPGEIGIRWTQEAPPSLPLSVKADLAEERMGDSSG 144

  Fly   192 ----------SANNSSSSEGEDSLSSTSPPPAHSHPHSHSHPTSCVSNSSSSSATRQALMAQKRI 246
                      .|.:.||.||:...:..||.........:....||.:..|::.:::         
 Frog   145 TEAGETYSDKDAEHRSSPEGKPCCTPDSPEVVPVAEAGYPGQKSCSTTDSTTDSSK--------- 200

  Fly   247 YKQRLRSLQQSTLHITAA----------------MEEYKQRFPTFSSPLMERMRK---------- 285
            |.:     :|..|.|..|                :|..|:.||:....::|.:.|          
 Frog   201 YPE-----EQGHLVIEGATGTVSLPFNLKANRPPLEVLKKIFPSQKPTVLELILKGCGGDLVGAV 260

  Fly   286 ------------RRAFADPEL------NHVMEATLGGNALYFATVAAAAAACAP----VHQEQHI 328
                        .|...:||.      .|:.|.||....|..:..:..:|...|    ...:.:.
 Frog   261 EVLLSSRSSVAGERTAPEPESIVLPHNGHLFEHTLSSYPLSSSKWSVGSAFRVPDTLRFSADSNN 325

  Fly   329 YHPMPPTIPLTIP-PTNP 345
            ..|.|..:||..| |.:|
 Frog   326 VVPNPLAVPLQHPFPQSP 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt11ENP_511146.2 DM 118..164 CDD:279137 31/45 (69%)
dmrt3NP_001243149.1 DM 24..70 CDD:279137 31/45 (69%)
CUE_DMA_DMRTA3 225..267 CDD:270602 6/41 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D383821at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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