DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt12 and SYTC

DIOPT Version :10

Sequence 1:NP_572878.1 Gene:Syt12 / 32290 FlyBaseID:FBgn0261085 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_974729.1 Gene:SYTC / 830301 AraportID:AT5G04220 Length:540 Species:Arabidopsis thaliana


Alignment Length:252 Identity:58/252 - (23%)
Similarity:98/252 - (38%) Gaps:43/252 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   503 LTVSVLEAKGLICPFSVESLDTFVRIYLVPDHPGAMQTKVVKGTLTPSYNESFDFWLHKRQARHS 567
            |.||:|.|:.|:....:.:.|.:|::.|..:...|.:|.:.|..|.|.:||.|.. :.|......
plant   263 LHVSILRARNLLKKDLLGTSDPYVKLSLTGEKLPAKKTTIKKRNLNPEWNEHFKL-IVKDPNSQV 326

  Fly   568 LWFHLY-------HNGPAHTLIGEAEMEIGE-------MPRPITTWIPLSDSRKCNARWGELMFS 618
            |...::       |:.....:|...::..||       :.:.....:...|.:|    .|.|...
plant   327 LQLEVFDWDKVGGHDRLGMQMIPLQKINPGERKEFNLDLIKNSNVVMDSGDKKK----RGRLEVD 387

  Fly   619 LSYLPTAERLTIVVVKARNLKLDGEQP----------APESAETV-----HSVFVKVYLMDKDRK 668
            |.|:|..|.......::|..|...:..          |.:||:.|     ||....|.|...:  
plant   388 LRYVPFREESIKRRKESREEKSSEDDDFLSQAGLLSVAVQSAKDVEGKKKHSNPYAVVLFRGE-- 450

  Fly   669 VLKKRTSLKRKDRSPIFNESMIFSVPPPSLTTTQLRVTVFGVTTS----GVTPLGHI 721
              ||:|.:.:|.|.|.:||...|::..|.:..: :||.|....|.    ....|||:
plant   451 --KKKTKMLKKTRDPRWNEEFQFTLEEPPVKES-IRVEVMSKGTGFHFRSKEELGHV 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt12NP_572878.1 C2 503..602 CDD:425499 23/112 (21%)
C2B_Synaptotagmin-12 612..753 CDD:176051 33/129 (26%)
SYTCNP_974729.1 DUF456 <7..>30 CDD:461257
SMP_SYT 62..248 CDD:439233
COG5038 67..>538 CDD:227371 58/252 (23%)
Blue background indicates that the domain is not in the aligned region.

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