DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt12 and SYTA

DIOPT Version :10

Sequence 1:NP_572878.1 Gene:Syt12 / 32290 FlyBaseID:FBgn0261085 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_001189566.1 Gene:SYTA / 816633 AraportID:AT2G20990 Length:579 Species:Arabidopsis thaliana


Alignment Length:285 Identity:69/285 - (24%)
Similarity:103/285 - (36%) Gaps:83/285 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   505 VSVLEAKGLICPFSVESLDTFVRIYLVPDHPGAMQTKVVKGTLTPSYNESFDFWLHKRQARHSLW 569
            |.|:.|.||.....:...|.||:|.|..|...:.:|.|....|.|.:||.|.|.:...|.: .|.
plant   302 VKVVRAVGLRKKDLMGGADPFVKIKLSEDKIPSKKTTVKHKNLNPEWNEEFKFSVRDPQTQ-VLE 365

  Fly   570 FHLYH----NGP-------------------AHTLIGEAEMEIGEMPRPITTWIPLSDSRKCNAR 611
            |.:|.    ..|                   |.||.....::.||..:|       .|..:    
plant   366 FSVYDWEQVGNPEKMGMNVLALKEMVPDEHKAFTLELRKTLDGGEDGQP-------PDKYR---- 419

  Fly   612 WGELMFSLSYLP-TAERLTIVVVKARNLKLDGEQPAPE--------------SAETVH-----SV 656
             |:|...|.|.| |.|.:.....:.:.:     |.|||              |||.|.     :.
plant   420 -GKLEVELLYKPFTEEEMPKGFEETQAV-----QKAPEGTPAAGGMLVVIVHSAEDVEGKHHTNP 478

  Fly   657 FVKVYLMDKDRKVLKKRTSLKRKDRSPIFNESMIFSVPPPSLTTTQLRVTVFGVTTSGVTPLGHI 721
            :|::|...::||     |...:|:|.|.:||...|.:..|.: ..:|.|.|.. |:|.:      
plant   479 YVRIYFKGEERK-----TKHVKKNRDPRWNEEFTFMLEEPPV-REKLHVEVLS-TSSRI------ 530

  Fly   722 VAGSCAVGKGLRHWHQMLSSLRKPV 746
                     ||.|..:.|..:..||
plant   531 ---------GLLHPKETLGYVDIPV 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt12NP_572878.1 C2 503..602 CDD:425499 30/119 (25%)
C2B_Synaptotagmin-12 612..753 CDD:176051 38/155 (25%)
SYTANP_001189566.1 COG5038 2..>512 CDD:227371 57/232 (25%)
SMP_SYT 60..286 CDD:439233
C2 461..568 CDD:472691 27/108 (25%)
Blue background indicates that the domain is not in the aligned region.

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