DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt12 and Syt13

DIOPT Version :10

Sequence 1:NP_572878.1 Gene:Syt12 / 32290 FlyBaseID:FBgn0261085 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_110466.3 Gene:Syt13 / 80977 RGDID:621877 Length:426 Species:Rattus norvegicus


Alignment Length:294 Identity:80/294 - (27%)
Similarity:127/294 - (43%) Gaps:65/294 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   489 LNYDQMSISNEGMELTVSVLEAKGLICPFSVESLDTFVRIYLVPDHPGAMQTKVVKGTLTPSYNE 553
            |:|||     :..||.|:.|||                   :..||.|.....:.......:.:.
  Rat   166 LDYDQ-----KKAELFVTSLEA-------------------VTSDHEGGCDCYIQGSVAVKTGSV 206

  Fly   554 SFDFWLHKRQARHSLWFHLYHNGPA-------------------------HTLIGEAEMEIGEMP 593
            .....|.|||. |:.|    ..|.|                         |::|||..:.:....
  Rat   207 EAQTALKKRQL-HTTW----EEGLALPLGEEELPTATLTLTLRTCDRFSRHSVIGELRLGLNGAS 266

  Fly   594 RPITT--WIPL-SDSRKCNARWGELMFSLSYLPTAERLTIVVVKARNLKLDGEQPAPESAETV-H 654
            .|:.|  |..| :.:::.:|..||::.|:||||.|.||.:|::||:||.      :.:|.|.: .
  Rat   267 VPLGTAQWGELKTTAKEPSAGTGEVLLSISYLPAANRLLVVLIKAKNLH------SNQSKELLGK 325

  Fly   655 SVFVKVYLMDKDRKVLKKRTSLKRKDRSPIFNESMIFSVPPPSLTTTQLRVTVFGVTTSGVT-PL 718
            .|.|||.|..:.:|:.||:|...:...:|::||.::|.:|...|..:.:.:.|.|....|.: .|
  Rat   326 DVSVKVTLKHQAQKLKKKQTKRAKHKINPVWNEMIMFELPDDLLQASSVELEVLGQGEEGPSCEL 390

  Fly   719 GHIVAGSCAVGKGLRHWHQMLSSLRKPVAMWHVL 752
            |....|..|.|....||.:||.:.|:.:||||.|
  Rat   391 GRCSLGLHASGSERSHWEEMLKNPRRQIAMWHQL 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt12NP_572878.1 C2 503..602 CDD:425499 23/125 (18%)
C2B_Synaptotagmin-12 612..753 CDD:176051 50/143 (35%)
Syt13NP_110466.3 C2 160..277 CDD:472691 28/139 (20%)
C2B_Synaptotagmin-13 288..425 CDD:176052 50/143 (35%)

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