DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt12 and Syt4

DIOPT Version :10

Sequence 1:NP_572878.1 Gene:Syt12 / 32290 FlyBaseID:FBgn0261085 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_113881.1 Gene:Syt4 / 64440 RGDID:68397 Length:425 Species:Rattus norvegicus


Alignment Length:373 Identity:100/373 - (26%)
Similarity:169/373 - (45%) Gaps:82/373 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   422 LSLGMGLGRR--NSSQVSLDSHAGSVPGSMDGINL---------ERAISCDSVTSDSTLFLDQLD 475
            |||.:.|.:|  |.:....:..|||   |.|..|:         :.|:|.:|:.|.::|..::..
  Rat    90 LSLHLDLEKRDLNGNFPKTNPKAGS---SSDLENVTPKLFPETEKEAVSPESLKSSTSLTSEEKQ 151

  Fly   476 QPYTQITGYLCVGLNYDQMSISNEGMELTVSVLEAKGLICPFSVE---SLDTFVRIYLVPDHPGA 537
            :.    .|.|.:.|.|     :.|.....|::.||:||  |...|   :.|.::::.::|:....
  Rat   152 EK----LGTLFLSLEY-----NFEKKAFVVNIKEAQGL--PAMDEQSMTSDPYIKMTILPEKKHK 205

  Fly   538 MQTKVVKGTLTPSYNESFDFWLHKRQARHSLWFHLYHNGPAHTLIGEAEME-------------- 588
            ::|:|::.||.|.::|:|.|:                 |..:..|.|..:.              
  Rat   206 VKTRVLRKTLDPVFDETFTFY-----------------GVPYPHIQELSLHFTVLSFDRFSRDDV 253

  Fly   589 IGEMPRPITTWIPLSDSR--------KCNAR----WGELMFSLSYLPTAERLTIVVVKARNLKLD 641
            |||:..|: :.|.|||.:        |.||:    .|||:.||.|..|...||:||:|||:|   
  Rat   254 IGEVLVPL-SGIELSDGKMLMTREIIKRNAKKSSGRGELLVSLCYQSTTNTLTVVVLKARHL--- 314

  Fly   642 GEQPAPES-AETVHSVFVKVYLMDKDRKVLKKRTSLKRKDRSPIFNESMIFSVPPPSLTTTQLRV 705
                 |:| ...:...:|||.|....:::.||:|.:|:...:.:|||..:|.:|..||....:..
  Rat   315 -----PKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEF 374

  Fly   706 TVF-GVTTSGVTPLGHIVAGSCAVGKGLRHWHQMLSSLRKPVAMWHVL 752
            .|. ....|....:|.:|.|:.|.|.|..||.::....|:.:|.||:|
  Rat   375 LVLDSERGSRNEVIGRLVLGATAEGSGGGHWKEICDFPRRQIAKWHML 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt12NP_572878.1 C2 503..602 CDD:425499 25/115 (22%)
C2B_Synaptotagmin-12 612..753 CDD:176051 47/143 (33%)
Syt4NP_113881.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 102..121 6/21 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 126..147 5/20 (25%)
C2A_Synaptotagmin-4-11 153..279 CDD:176034 33/154 (21%)
C2B_Synaptotagmin-4 288..423 CDD:176049 47/143 (33%)

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