DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt12 and sytl5

DIOPT Version :10

Sequence 1:NP_572878.1 Gene:Syt12 / 32290 FlyBaseID:FBgn0261085 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_686619.6 Gene:sytl5 / 558324 ZFINID:ZDB-GENE-070912-424 Length:692 Species:Danio rerio


Alignment Length:635 Identity:140/635 - (22%)
Similarity:235/635 - (37%) Gaps:163/635 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 VLPQPLEAPPPPRLTASTSVNLSGTAIPRPIAKRQVSTQPANNSGCQPEQTVVTPMREGERKAPA 262
            |:.|.:.:.||...:|:..:.:..::.|:  ::|.|:.|...::|         ..|:|:| |.|
Zfish   139 VVKQSILSSPPDGGSANRPLEMERSSTPK--SERSVTPQSQKSTG---------KNRKGKR-AVA 191

  Fly   263 LKRRNSSTNPFLCESTEQIPSNPI-SEPLNATVASLEKTTISTSECTPITAPLETPNGPISTD-- 324
            ::.....|.|  .....|:...|. :|..|....:...::|.:|:    :.|.:..:|...||  
Zfish   192 VEPSGLPTVP--NNMRAQMAKTPTQTEARNRPDGAESVSSIQSSD----SVPEKMADGRRQTDSS 250

  Fly   325 TPSTIHHNGNPFVERESLSS-RLLKIHNTTNPFTGLSQRVKGPHLLQKTISEDYLFRKLGVNCPM 388
            |||..       |.|.|||| |.....:.:||..||              |||.|..:    |..
Zfish   251 TPSIA-------VSRASLSSDRSRSEVDLSNPGEGL--------------SEDPLISR----CRS 290

  Fly   389 ANGNGTGPGSGHVNGNGNGTWSFGRSLLRQDSTLSLGMGLGRRNSSQVSLDSHAGS--------V 445
            ..|...|.....:                 |:.||......|...|..|:.|...|        |
Zfish   291 VPGLNDGDSDEDI-----------------DAVLSAHYKTNRSVCSAQSMSSTPASERKWGFLNV 338

  Fly   446 PGSMDGINLERAISCDSVTSDSTLFLDQLDQPYTQITGYLCVGLNYDQMSISNEGMELTVSVLEA 510
            |.|        .....|:.|..:::.:..|....:::|.:.:.::|     |.:...|.|.|.|.
Zfish   339 PDS--------DADTTSINSLMSVYSETGDYGSVRVSGEILLNISY-----SYKTGALNVLVREC 390

  Fly   511 KGLIC-PFSVESLDTFVRIYLVPD--HPGAMQTKVVKGTLTPSYNESFDF-----WLHKRQARHS 567
            :.|.. ....:..|.:|:.||:||  .....:|.:...:..|.:||:..:     .|..|..:.|
Zfish   391 RCLATGDERRQRTDAYVKTYLLPDKSRQSKRKTSIKSNSTNPVFNENLRYVVSHSQLETRTLQVS 455

  Fly   568 LWFH--LYHNGPAHTLIGEAEM--EIGEMPRPITTWIPL-----SDSRKCNARW-GELMFSLSYL 622
            :|.|  ..||    ..:||.|:  :..|....|..|..|     ||.......: |||...|.|:
Zfish   456 VWHHDRFGHN----NFLGETELTFDSWEFDTQIEEWFALQPRIESDYVDSVMHYKGELTVVLKYI 516

  Fly   623 PTAER------------------------------LTIVVVKARNL-KLDGEQPAPESAETVHSV 656
            | |||                              :.::|.:|:|| .:.|....|         
Zfish   517 P-AERNVSLPLDQVQVKKGFLKGKKKTITLPKGGMVELLVKEAKNLTAVKGGSSDP--------- 571

  Fly   657 FVKVYLMDKDRKVLKKRTSLKRKDRSPIFNESMIF-SVPPPSLTTTQLRVTVF------------ 708
            |||.||:..|:|..|.:|::.::..:|.:|.:..: .:....|.:..|.:||:            
Zfish   572 FVKGYLLPDDKKSTKHKTAVVKRSVNPRWNHTFTYCGLQHSDLDSVCLELTVWDREPFASNVFLG 636

  Fly   709 GVTTSGVTPL--GHIVAGSCAVGKGLRHWHQMLSSLRKPVAMWHVLRRAV 756
            ||.....|.|  |..|..:.|.|:..|.|.:|:.:...|.....:||.::
Zfish   637 GVRLGAGTGLSYGKEVDWNDAYGEEQRLWQRMIDNPEVPQECTLMLRSSM 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt12NP_572878.1 C2 503..602 CDD:425499 28/110 (25%)
C2B_Synaptotagmin-12 612..753 CDD:176051 42/187 (22%)
sytl5XP_686619.6 PHD_SF 13..124 CDD:473978
PHA03247 <132..401 CDD:223021 70/334 (21%)
C2A_SLP-4_5 367..491 CDD:175995 31/132 (23%)
C2B_SLP_1-2-3-4 506..683 CDD:175987 42/186 (23%)
Blue background indicates that the domain is not in the aligned region.

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