DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt12 and sytl2

DIOPT Version :10

Sequence 1:NP_572878.1 Gene:Syt12 / 32290 FlyBaseID:FBgn0261085 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_012812257.2 Gene:sytl2 / 493264 XenbaseID:XB-GENE-945155 Length:2036 Species:Xenopus tropicalis


Alignment Length:724 Identity:145/724 - (20%)
Similarity:239/724 - (33%) Gaps:224/724 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RSSKEEKIGLSNHKQKLFHANGYM---ASIQSGSEFL--LSTSGSFKRFDTID---KEDYNRSQQ 94
            |||||              .:||.   |.:::.....  ||.:.|.|...|::   :.|.|..:.
 Frog  1382 RSSKE--------------LDGYSKLNAQLKTKDNLKDNLSDTSSTKTASTLNDLQERDENVYKD 1432

  Fly    95 THQTHLFLMNGGGAV---SITGSSSA------------LQATTAMWHLPRSGIKIPPPPDRP--- 141
            ........::|..|.   .|.|..:|            :.|....|..|.|       .|.|   
 Frog  1433 ISSRESSSVDGASAAVIGDIIGKDAASLDLHQHTDEEEIGAREWNWEEPES-------QDNPTFI 1490

  Fly   142 APSPNSAAAAGKTVTFSLSQVNEVIMPGEQVTSNDQERRSCLRQNGGTAGGAGGGGVLPQPLEAP 206
            :..|:......|.|..::..     :|..:...|:.:|.:..::.|.|                 
 Frog  1491 SNMPSRDVVISKKVYSTIES-----LPSYKDKENNLDRLTEPQEQGST----------------- 1533

  Fly   207 PPPRLTASTSVNLSGTAIPRPIAKRQVSTQPANNSGCQPEQTVVTPMREGERKAPALKRRNS--- 268
                 |.....:|...|....:.|...|.|    ||...|.:.....::.|.::|...:|||   
 Frog  1534 -----TQRKPQDLYFAARYEVLDKNSGSDQ----SGSVTESSGNLLYKKPESESPDASKRNSIDP 1589

  Fly   269 -----STNPFL----CESTEQIPSNPISEPLNATVASLEKTTISTSECTPITAPLETPNGPISTD 324
                 .::|.|    ..||:.:|..|:.|      .||||     |....||.|.|..:......
 Frog  1590 KQGIEESDPILRALKRSSTKTLPPLPVQE------VSLEK-----SNQDDITVPKEDRDHTYEEV 1643

  Fly   325 TPSTIHHNGNPFVERESLSSRLLKIHNTTNPFTGLSQRVKGPHLLQKTISEDYLFRKLGVNCPMA 389
            ....:....:.|.:.|.|..              |||.|  |..|    ::|            .
 Frog  1644 RADKVVPERSHFSDPEKLKR--------------LSQSV--PSFL----NDD------------T 1676

  Fly   390 NGNGTGPGSGHVNGNGNGTWSFGRSLLRQDSTLSLGMGLGRRNSSQVSLDSHAGSVPGSMDGINL 454
            :|..|                        ||.......|||...|..||.:.:||          
 Frog  1677 DGRET------------------------DSASESSFQLGRHKKSPSSLTNLSGS---------- 1707

  Fly   455 ERAISCDSVTSDSTLFLDQLDQPYTQITGYLCVGLNYDQMSISNEGMELTVSVLEAKGL-ICPFS 518
             ..::..|..|.|.:.:...|.....|.|.:...|:|     ::...|..|.|.:.|.| .....
 Frog  1708 -SGMASLSSVSGSVMSIYSGDFGNVDIKGNIQFALDY-----ADNLQEFQVFVSQCKDLAAADVK 1766

  Fly   519 VESLDTFVRIYLVPDHP--GAMQTKVVKGTLTPSYNESFDFWLHK-----RQARHSLWFH--LYH 574
            .:..|.:|:.||:|:..  |..:|.|.|.||.|.||:...:.:.|     :....|:|.|  |..
 Frog  1767 KQRSDPYVKAYLLPEKAKMGKRKTGVKKKTLNPVYNDVLRYKISKNALLSQTLNLSVWHHDVLGR 1831

  Fly   575 NGPAHTLIGEAEMEIG--EMPRPITTWIPLS----------DSRKCNARWGELMFSLSYLPTA-- 625
            |    :.:||.::.:.  :.......|.||.          ::|      ||:..:|.|:|.|  
 Frog  1832 N----SFLGEVDVNLASWDWSNKQMNWYPLQPRTPAAGIGLENR------GEMKLALKYVPEAFT 1886

  Fly   626 -------ERLTIVVVKARNL-KLDGEQPAPESAETVHSVFVKVYLMDKDRKVLKKRTSLKRKDRS 682
                   ..:.|.:.:..|| .|.|.:        ::| |:|..::....:..:::|....|..:
 Frog  1887 GAKNAGTGEVHIWLKECTNLPMLRGNK--------INS-FIKCTILPDTSRKSRQKTRAVDKTPN 1942

  Fly   683 PIFNESMIF 691
            |.||.:|::
 Frog  1943 PYFNHTMVY 1951

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt12NP_572878.1 C2 503..602 CDD:425499 27/110 (25%)
C2B_Synaptotagmin-12 612..753 CDD:176051 20/90 (22%)
sytl2XP_012812257.2 PHD_SF 5..>44 CDD:473978
C2A_SLP-1_2 1734..1858 CDD:176039 32/132 (24%)
C2B_SLP_1-2-3-4 1871..2027 CDD:175987 21/96 (22%)
Blue background indicates that the domain is not in the aligned region.

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