DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt12 and stac

DIOPT Version :10

Sequence 1:NP_572878.1 Gene:Syt12 / 32290 FlyBaseID:FBgn0261085 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_651329.4 Gene:stac / 43002 FlyBaseID:FBgn0266719 Length:1153 Species:Drosophila melanogaster


Alignment Length:195 Identity:42/195 - (21%)
Similarity:65/195 - (33%) Gaps:72/195 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LVTCNKCLRIISYTKNRIGPGREDHEEKIQCSILGESADFVI--DTNSFRDEMIARNFYTEACYN 175
            |.||:.|    |:.          .::|...|:.|...:...  ||..|.        :|.|...
  Fly    40 LTTCDLC----SWA----------WQDKGSLSLDGAIKEIFTSSDTKEFN--------WTFALIV 82

  Fly   176 VSMHQEH-----FYVFCRCSQTNCNSPESPIPYPLSPPTVSCFTSGFEAYVFPTK-YSTP----- 229
            ||:....     ..||.||.:||                     ||...:....| .|||     
  Fly    83 VSLTSAFLGAIIMIVFLRCKRTN---------------------SGLWTWFSSRKNLSTPDQLVN 126

  Fly   230 -NTWHVDNYKKIMSNESY----VDENSTCHGDMCFIAKVAADAGEYDFDVYYKGCISTNEHGNNS 289
             :|..|:|:...|.:.:|    :||.|        .|:|..:.|..:...|..|.:   :||.::
  Fly   127 SHTLPVENHYTHMDDNNYNPVQIDEAS--------YAEVGNEIGPSETTSYKSGSV---QHGTDN 180

  Fly   290  289
              Fly   181  180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt12NP_572878.1 C2 503..602 CDD:425499
C2B_Synaptotagmin-12 612..753 CDD:176051
stacNP_651329.4 C2 152..317 CDD:472691 8/40 (20%)
MUN <637..1003 CDD:461870
C2B_Munc13-like 990..1116 CDD:175976
Blue background indicates that the domain is not in the aligned region.

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