DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt12 and Sytalpha

DIOPT Version :10

Sequence 1:NP_572878.1 Gene:Syt12 / 32290 FlyBaseID:FBgn0261085 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster


Alignment Length:466 Identity:123/466 - (26%)
Similarity:193/466 - (41%) Gaps:85/466 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   315 ETPNGPISTDTPSTIHHNGNPFVERESLSSRLLKIHNTTNPFTGLSQRVKGPHLLQKTISEDYLF 379
            |.|.|..|         :||    ..:||...||..: .:|...:...|.....:|:.:|     
  Fly    90 EVPRGKYS---------SGN----AGNLSPTSLKSED-NDPAFWVPASVTSTAAIQQQVS----- 135

  Fly   380 RKLGVNCPMANGNGTGPGSGHVNGNGNGTWSFGRSLLRQDSTLSLGMGLGRRNSSQVSLDSHAGS 444
                 |....:...|.|           |.|...:.|...||.|:.:.   |:...|.|..|. |
  Fly   136 -----NTTEESAPPTSP-----------TGSLKSNTLSYCSTTSVPIA---RSDKHVVLAMHP-S 180

  Fly   445 VP--GSMDGINLERAISCDSVTSDSTLFLDQLDQPYT-------QITGYLCVGLNYDQMSISNEG 500
            .|  .||:.       ..|....|.||:... .||.|       ::.|.|.|.|.||.:     |
  Fly   181 RPRVSSMNA-------KLDHTKIDMTLYRSH-SQPKTINPVSLNEVRGNLHVSLGYDPV-----G 232

  Fly   501 MELTVSVLEAKGLICPFSVESLDTFVRIYLVPDHPGAMQTKVVKGTLTPSYNESFDF-----WLH 560
            ..|.|.:|||:.|.......:.|.:.::.|:||.....||::.|.||.|.::|.|.|     .:.
  Fly   233 GLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVID 297

  Fly   561 KRQARHSLW-FHLYHNGPAHTLIGEAEMEIG--EMPRPITTWIPLS--DSRKCNARWGELMFSLS 620
            ||.....|: |..|..   |..||.:::.:.  ::...:..|.|||  .::......|::|.||:
  Fly   298 KRTVEILLYDFDAYSR---HVCIGGSKLHLANLDLSEQLKLWTPLSSASAQDMKVDLGDIMVSLA 359

  Fly   621 YLPTAERLTIVVVKARNLKLDGEQPAPESAETVHSVFVKVYLMDKDRKVLKKR-TSLKRKDRSPI 684
            |||:||||.:|::|||||::      .:.|......:|||.|:....|.:||| |.::|...:|:
  Fly   360 YLPSAERLMVVLIKARNLRI------VDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPV 418

  Fly   685 FNESMIFSVPPPSLTTTQLRVTVF--GVTTSGVTPLGH-IVAGSCAVGKGLRHWHQMLSSLRKPV 746
            :||::.|.|...:|....|..||.  |:..|... ||. ::..|..|....:.:.:.:...:...
  Fly   419 YNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEI-LGRTLIGNSPEVRTEEKIFFEEVFRAKNAT 482

  Fly   747 AMWHVLRRAVN 757
            |.|..|:...|
  Fly   483 AQWVPLQEPAN 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt12NP_572878.1 C2 503..602 CDD:425499 28/106 (26%)
C2B_Synaptotagmin-12 612..753 CDD:176051 45/144 (31%)
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 37/130 (28%)
C2B_Synaptotagmin 352..488 CDD:175975 45/142 (32%)

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