DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt12 and Sytl5

DIOPT Version :10

Sequence 1:NP_572878.1 Gene:Syt12 / 32290 FlyBaseID:FBgn0261085 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_848016.2 Gene:Sytl5 / 302538 RGDID:631342 Length:753 Species:Rattus norvegicus


Alignment Length:820 Identity:168/820 - (20%)
Similarity:271/820 - (33%) Gaps:259/820 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LGILF----ACHCLGPRAANWMRMRSSKEEKIGLSNHKQKLFHANGYMASIQSGSEFLLSTSGSF 78
            ||::|    .|.....|..:..|:       .||....:....|......|.||..||...:..|
  Rat    71 LGLIFDRGDPCQACSLRVCSECRV-------TGLDGSWKCTVCAKVAQLRIISGEWFLEEKAKRF 128

  Fly    79 KRFDTI--------------DKEDYNRSQQTHQTHLFLMNGGGAVSITGSSSALQAT-------- 121
            |:.:.:              ..|:....:|.||        |...|.|.||...:||        
  Rat   129 KQVNVLGTDVVRQSILRRSPGSEEIQNQEQAHQ--------GADKSDTLSSVRQKATHDGPKRKG 185

  Fly   122 ---TAMWHLPRSGIKIPPPPDRPAPSPNSAAAAGKTVTFSLSQVNEVIMPGEQVTSNDQERRSCL 183
               :......|..||.|            .|.:|:  ::||...|:.:...:.|:.:|  |.|..
  Rat   186 FLLSKFRSATRGEIKTP------------KAESGR--SYSLDLDNQNLQSFKSVSGSD--RGSTT 234

  Fly   184 RQN--------GGTAGGAGGGGVLPQPLEAPPPPRLTASTSVNLSGTAIPRPIAKRQVSTQPANN 240
            ..:        |...|....||: |....:|.|                    :.|.|::..:..
  Rat   235 SSDLIDQEAGRGAPKGSCSNGGI-PVTQRSPAP--------------------SARSVTSISSRE 278

  Fly   241 SGCQPEQTVVTPMREGERKAPALKRRNSSTNPFLCESTEQIPSNPISEPLNATVASLEKTTISTS 305
            .|.:....:.|.....|....: .|||:|..|.:..|...:.|......|:.:.:..|       
  Rat   279 HGFENSMALATIESISEELTKS-HRRNTSGTPSIAVSGTSLSSERSRSELDLSESFAE------- 335

  Fly   306 ECTPITAPLETPNGPISTDTPSTIHHNGNPFVERES----LSSRLLKIHNTTNPFTGLSQRVKGP 366
                   .||..:...|...|..:..:.|...:.|.    :|||...  ||.:..:|||      
  Rat   336 -------DLEDTSSIRSRSVPGALDKDLNSLEDTEDGVDLVSSRFSA--NTHSLASGLS------ 385

  Fly   367 HLLQKTISEDYLFRKLGVNCPMANGNGTGPGSGHVNGNGNGTWSFGRSLLR----QDSTLSLGMG 427
                 |.|:....||                               ||.|.    ...|.||   
  Rat   386 -----TSSQAGSDRK-------------------------------RSYLHVPDADSDTTSL--- 411

  Fly   428 LGRRNSSQVSLDSHAGSVPGSMDGINLERAISCDSVTSDSTLFLDQLDQPYTQITGYLCVGL-NY 491
                 :|.:|:.|..|.. |::            .||.:..|.:.     |...||.|.:.: |.
  Rat   412 -----NSMMSVYSETGDY-GNV------------KVTGEILLHIS-----YCYKTGGLYIFVKNC 453

  Fly   492 DQMSISNEGMELTVSVLEAKGLICPFSVESLDTFVRIYLVPD--HPGAMQTKVVKGTLTPSYNES 554
            ..::|.:|..:.|                  |.:|:.||:||  .....:||:..|| .|.:||:
  Rat   454 RNLAIGDEKKQRT------------------DAYVKSYLLPDKTRNNKRKTKIRTGT-NPEFNET 499

  Fly   555 FDF-----WLHKRQARHSLWFHLYHNGPAHTLIGEAEM--EIGEMPRPITTW------IPLSDSR 606
            ..:     .|..|..:.|:|.  |.....::.:||.|:  :......|...|      :.|:...
  Rat   500 LKYTISHTQLETRTLQLSVWH--YDRFGRNSFLGEVEIAFDSWNFENPCDEWFVLQPKVELAPDI 562

  Fly   607 KCNARWGELMFSLSYLPTAERLTIVVVKARNLKL-----DGEQPA---------PESAETVHSV- 656
            ....: |||...|.|:|..|.|...|.:.:..|:     ..|.||         .:.|:.:.:| 
  Rat   563 SLQYK-GELTIVLRYIPPEENLIFPVEQPQGKKIFKKGKKKESPAISGGILEVFIKEAKNLTAVK 626

  Fly   657 -------FVKVYLMDKDRKVLKKRTSLKRKDRSPIFNESMIFS-VPPPSLTTTQLRVTVF----- 708
                   |||.||:..|.|..|.:|::.:|..:|.:|...||| :.|..:....|.:|::     
  Rat   627 AGGTSDSFVKGYLLPDDNKATKHKTAVVKKSVNPQWNHVFIFSGLYPQDIQNACLELTIWDKEAF 691

  Fly   709 -------GV---TTSGVTPLGHIVAGSCAVGKGLRHWHQM 738
                   ||   :.||::. |..|....:.|:..|.|.:|
  Rat   692 SSNIFLGGVRLNSGSGISH-GKAVDWMDSRGEEQRLWQKM 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt12NP_572878.1 C2 503..602 CDD:425499 24/113 (21%)
C2B_Synaptotagmin-12 612..753 CDD:176051 43/165 (26%)
Sytl5NP_848016.2 PHD_SF 11..123 CDD:473978 14/58 (24%)
FYVE_Slp5 62..108 CDD:277305 8/43 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..188 11/50 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..283 14/84 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 298..359 14/75 (19%)
C2A_SLP-4_5 430..553 CDD:175995 33/148 (22%)
C2B_SLP_1-2-3-4 567..745 CDD:175987 43/166 (26%)

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