DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt12 and Sytl1

DIOPT Version :10

Sequence 1:NP_572878.1 Gene:Syt12 / 32290 FlyBaseID:FBgn0261085 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_001385966.1 Gene:Sytl1 / 297872 RGDID:1310715 Length:562 Species:Rattus norvegicus


Alignment Length:396 Identity:89/396 - (22%)
Similarity:145/396 - (36%) Gaps:127/396 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   419 DSTLSLGMGLGRRNSSQVSLDS-HAGSVPGSMDGINLERAISCDSVTSDSTLFLDQLDQPYTQIT 482
            :.|..||..|.|..||..|:.| ::.::.||:..::                  .:.:....|:.
  Rat   221 EETPGLGPSLDRMLSSSSSVSSLNSSTLSGSLKSLS------------------GEAEAGPVQVR 267

  Fly   483 GYLCVGLNYDQMSISNEGMELTVSVLEAKGLICPFSVESLDTFVRIYLVPDHPGAMQTKVVKGTL 547
            |.:...|.|:    ...| ||.|.|::.:||.......| |.:|:.||:||.....:|.|.|..|
  Rat   268 GSVLFSLRYE----PGTG-ELRVQVIQCQGLAAARRRRS-DPYVKSYLLPDKQNKRKTSVKKRNL 326

  Fly   548 TPSYNESFDFWLHKRQARHS----------LWFHLYHNGPAHTLIGEAEMEIGEMPRPITTW--- 599
            .|.:||:.         |||          |...::|    ...:|. .:.:||:..|:.||   
  Rat   327 NPIFNETL---------RHSVQQADLPGRVLSLSVWH----RESLGR-NIFLGEVEVPLDTWNWD 377

  Fly   600 -----------IPLS----DSRKCNARWGELMFSLSYLPTAERLTIVVVKARNLKLDGEQP---- 645
                       ||.|    .||      |.|..||.|:|....             .|.||    
  Rat   378 SEATWLPLQPRIPTSPDELPSR------GLLSLSLKYIPAGSE-------------GGGQPPSGE 423

  Fly   646 --------------APESAETVHSVFVKVYLMDKDRKVLKKRTSLKRKDRSPIFNESMIF-SVPP 695
                          .|.|.:|    :::..::..|.:..::||.:.|:..||:||.:|:: ...|
  Rat   424 LHFWIKEAQGLVPLRPGSLDT----YIQCSVLPDDSRASRQRTRVVRRSLSPVFNHTMVYDGFGP 484

  Fly   696 PSL--TTTQLRVTVFGVTTS---GVTPLGHIVAGSCAVGKGLRHWHQM--LSSLRKPVAMWHVLR 753
            ..|  ...:|.:...|...|   |.|.|        ::|.|..:..|:  :.|..:...:|..| 
  Rat   485 ADLRQACAELSLWDHGALASRQLGGTRL--------SLGTGSSYGLQVPWMDSTPEEKQLWQTL- 540

  Fly   754 RAVNQP 759
              :.||
  Rat   541 --LEQP 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt12NP_572878.1 C2 503..602 CDD:425499 31/122 (25%)
C2B_Synaptotagmin-12 612..753 CDD:176051 34/166 (20%)
Sytl1NP_001385966.1 PHD_SF 35..>90 CDD:473978
C2 267..386 CDD:472691 35/138 (25%)
C2B_SLP_1-2-3-4 399..555 CDD:175987 38/180 (21%)
Blue background indicates that the domain is not in the aligned region.

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