DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt12 and sue-1

DIOPT Version :10

Sequence 1:NP_572878.1 Gene:Syt12 / 32290 FlyBaseID:FBgn0261085 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_492083.2 Gene:sue-1 / 184108 WormBaseID:WBGene00006306 Length:537 Species:Caenorhabditis elegans


Alignment Length:606 Identity:116/606 - (19%)
Similarity:203/606 - (33%) Gaps:143/606 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 AIPRPIAKRQVSTQP------ANNSGCQPEQTVVTPMREGERKAPALKRRNSSTNPFLCESTEQI 281
            |:..|..:|::...|      :::....|....::|.......||.|:||.|.         .|:
 Worm    14 ALLEPTCRRRLPMPPDTHLRRSSSPRILPTPPPLSPEYRCPSAAPHLERRPSG---------RQL 69

  Fly   282 PSNPISEPLNATVASLEKTTISTSEC--TPIT-APLETPNGP-----ISTDTPSTIHHNGNPFVE 338
            |..|.:|..|.|  ||.......|:|  :|:: .|..||:.|     ...|....:..:.....|
 Worm    70 PRPPTAELSNLT--SLAHNGPGNSQCSLSPVSLTPDPTPDEPEFYEEEDVDESEVVEEDYAQEEE 132

  Fly   339 RESLSSRLLKIHN---TTNPFTGLSQRVK--GPHLLQKTISEDYLFRKLGVNCP----MANGNGT 394
            .|.....:::..:   .|.|     :.::  .|.:|.....:.....|..|:.|    :.:.:.:
 Worm   133 EEGDDGEVVEYEDPVVVTPP-----EEIRRISPEILIAPPPQPRRMSKFSVHSPSIEQITSKSSS 192

  Fly   395 GPGSGHVNGNGNGTWSFGRSLLRQDSTLSLGMGLGRRNSSQVSLDSHAGSVPGSMDGINLERAIS 459
            .......:|.....:|....::.:::..::         .:.|:.|.:...|....|:.|   :.
 Worm   193 DTEDPIAHGLDPSLYSPNAPIIIENNNTAI---------HKTSVASSSSPTPQQPRGLGL---LH 245

  Fly   460 CDSVTSDSTLFLDQLDQPYTQITGYLCVGLNYDQMSISNEGMELTVSVLEAKG----------LI 514
            |..:                    |..|          .:.:.:||:.:||..          .:
 Worm   246 CSLL--------------------YFAV----------RKRLRVTVTKIEALAGELKPEMEIHAL 280

  Fly   515 CPFSVESLDTFVRIYLVPDHPGAMQTKVVKGTLTPSYNES--FDFWLHKRQARHSLWFHLYHNGP 577
            |..|:..|           ..|..||...|....|.:|..  ||...|:......:.....|.|.
 Worm   281 CKVSIPGL-----------KGGKEQTSETKRGRDPLFNHEFFFDNVTHEELDTKVVIITACHAGG 334

  Fly   578 AHTLIGEAEMEIGEMPRPITTWIPLSDSRKCNA----------------RWGELMFSLSYLPTAE 626
            .   |...|:.|||..      :||.|.|:.|.                :.|::..|......::
 Worm   335 G---IKGKEIVIGEAS------VPLRDIREMNTKKEIKFIEEIKGLVPKKLGKIYTSSIIEKDSK 390

  Fly   627 RLTIVVVKARNLKLDGEQPAPESAETVHSVFVKVYLMDKDRKVLKKRTSLKRKDRSPIFNESMIF 691
            ||||.:.|...|...|...||:       |.||:.| .:..|...|.:.:.:...|.::||:::|
 Worm   391 RLTINLKKVDALPKCGLIGAPD-------VCVKITL-TQGAKTQTKSSRVIKNTCSAVYNEAVMF 447

  Fly   692 --SVPPPSLTTTQLRVTVFGV--TTSGVTPLGHIVAGSCAVGKG-LRHWHQMLSSLRKPVAMWHV 751
              ......|..|.:.::|...  |.:|...:|....|..||.|. :..|......|.|.....|.
 Worm   448 LCGTSKNDLAQTSIVISVHDAQRTCTGDDTIGCAYLGIGAVDKSEIDQWKGTTEHLGKEYKGNHT 512

  Fly   752 LRRAVN-QPIFTGGAEAVVAA 771
            |:..:. .|:....|...|||
 Worm   513 LKAPITAPPVHVAEANDDVAA 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt12NP_572878.1 C2 503..602 CDD:425499 23/110 (21%)
C2B_Synaptotagmin-12 612..753 CDD:176051 35/145 (24%)
sue-1NP_492083.2 C2 242..349 CDD:472691 27/159 (17%)
C2 389..513 CDD:472691 33/131 (25%)

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