DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt12 and snt-1

DIOPT Version :10

Sequence 1:NP_572878.1 Gene:Syt12 / 32290 FlyBaseID:FBgn0261085 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_495394.3 Gene:snt-1 / 174120 WormBaseID:WBGene00004921 Length:443 Species:Caenorhabditis elegans


Alignment Length:280 Identity:93/280 - (33%)
Similarity:150/280 - (53%) Gaps:33/280 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   489 LNYDQMSISNEGMELTVSVLEAKGLICPFSVESLDTFVRIYLVPDHPGAMQTKVVKGTLTPSYNE 553
            |:||    ..:| :|||:|::|:.|.......:.|.:|::||:|:....::|||.:.||.|.:||
 Worm   167 LDYD----FQQG-QLTVTVIQAEDLPGMDMSGTSDPYVKLYLLPEKKKKVETKVHRKTLNPVFNE 226

  Fly   554 SFDFWLHKRQ-ARHSLWFHLY-------HNGPAHTLIGEAEMEIGEMPRPITTW---IPLSDSRK 607
            :|.|.:...: ...:|.|.:|       |:.....||...::::|.:   |..|   .|..|.::
 Worm   227 TFIFKVAFNEITAKTLVFAIYDFDRFSKHDQIGQVLIPLGKIDLGAV---IEEWKDIAPPPDDKE 288

  Fly   608 CNARWGELMFSLSYLPTAERLTIVVVKARNL-KLD-GEQPAPESAETVHSVFVKVYLMDKDRKVL 670
            .....|::.|||.|:|||.:||:|:::|:|| |:| |....|         :||:.:..:|||.|
 Worm   289 AEKSLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDP---------YVKLEMFGEDRKRL 344

  Fly   671 -KKRTSLKRKDRSPIFNESMIF-SVPPPSLTTTQLRVTVFGVTTSGVT-PLGHIVAGSCAVGKGL 732
             ||:|::|||..:|.||||.:| .:|...:....|.:||......|.. .:|..:.|....|..|
 Worm   345 KKKKTNIKRKTLNPYFNESFVFDKLPLHKMKKVSLMITVMDYDKLGSNDAIGRCLLGCNGTGAEL 409

  Fly   733 RHWHQMLSSLRKPVAMWHVL 752
            |||..||:|.|:|:|.||.|
 Worm   410 RHWMDMLASPRRPIAQWHTL 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt12NP_572878.1 C2 503..602 CDD:425499 30/109 (28%)
C2B_Synaptotagmin-12 612..753 CDD:176051 57/146 (39%)
snt-1NP_495394.3 Syt1_2_N <62..>108 CDD:425364
C2A_Synaptotagmin-1-5-6-9-10 160..282 CDD:176031 34/122 (28%)
C2B_Synaptotagmin-1 293..429 CDD:176047 56/144 (39%)
Blue background indicates that the domain is not in the aligned region.

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