DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt12 and Doc2a

DIOPT Version :10

Sequence 1:NP_572878.1 Gene:Syt12 / 32290 FlyBaseID:FBgn0261085 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_034199.1 Gene:Doc2a / 13446 MGIID:109446 Length:405 Species:Mus musculus


Alignment Length:437 Identity:108/437 - (24%)
Similarity:159/437 - (36%) Gaps:118/437 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   365 GPHLLQKTISEDYLFRKLGVNCPMANGNGTGPGSGHVNGNGNGTWSFGRSLLRQDSTLSLGMGLG 429
            ||....:.|| ||..|:           |.||..|   |.|.||                |.|..
Mouse    24 GPIRPIRQIS-DYFPRR-----------GPGPEGG---GGGGGT----------------GCGEA 57

  Fly   430 RRNSSQVSLDSHAGSVPGSMDGINLERAISCDSVTSDSTLFLDQLDQPYTQITGYLCVGLNYDQM 494
            ..:.:.::|     :.|.::.|          :.|.|....:|..|...|...|.|...|.|||.
Mouse    58 PAHLAPLAL-----APPAALLG----------ATTPDDGAEVDSYDSDDTTALGTLEFDLLYDQA 107

  Fly   495 SISNEGMELTVSVLEAKGLICPFSVESL-DTFVRIYLVPDHPGA-----MQTKVVKGTLTPSYNE 553
            |..     |...:|.|||| .|.....| |.:|:::|:   |||     ::||..:.||.|.:||
Mouse   108 SCM-----LHCRILRAKGL-KPMDFNGLADPYVKLHLL---PGACKANKLKTKTQRNTLNPVWNE 163

  Fly   554 SF-------DFWLHKRQARHSLWFH--LYHNGPAHTLIGEAEMEIGEMPRP---------ITTWI 600
            ..       |...|| ..|.|:...  |.||    ..|||..:.:..: :|         :...:
Mouse   164 ELTYSGITDDDITHK-VLRISVCDEDKLSHN----EFIGEIRVPLRRL-KPSQKKHFNICLERQV 222

  Fly   601 PLSDSRKCNA-----------------------RWGELMFSLSYLPTAERLTIVVVKARNLKLDG 642
            ||......:|                       ..|.::.||||......|.:.:|:..:|    
Mouse   223 PLPSPSSMSAALRGISCYLKELEQAEQGPGLLEERGRILLSLSYSSRRHGLLVGIVRCAHL---- 283

  Fly   643 EQPAPESAETVHSVFVKVYLM-DKDRKVLKKRTSLKRKDRSPIFNESMIFSVPPPSLTTTQLRVT 706
               |..........:||.||. |.|:| .|.:|.:|:|..:|.|||...:.:...:|.|..|.||
Mouse   284 ---AAMDVNGYSDPYVKTYLRPDVDKK-SKHKTCVKKKTLNPEFNEEFFYEIELSTLATKTLEVT 344

  Fly   707 VFGVTTSGVTP-LGHIVAGSCAVGKGLRHWHQMLSSLRKPVAMWHVL 752
            |:......... :|.:..|..|.|:..:||:..|......:..||.|
Mouse   345 VWDYDIGKSNDFIGGVSLGPGARGEAQKHWNDCLHQPDTALERWHTL 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt12NP_572878.1 C2 503..602 CDD:425499 33/122 (27%)
C2B_Synaptotagmin-12 612..753 CDD:176051 40/143 (28%)
Doc2aNP_034199.1 Interaction with UNC13D and DYNLT1. /evidence=ECO:0000250 1..94 25/115 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..54 11/49 (22%)
C2A_Rabphilin_Doc2 95..218 CDD:176000 40/137 (29%)
Interaction with UNC13D. /evidence=ECO:0000250 220..405 43/180 (24%)
C2B_Rabphilin_Doc2 259..391 CDD:176030 38/139 (27%)

Return to query results.
Submit another query.