DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt12 and sytl3

DIOPT Version :10

Sequence 1:NP_572878.1 Gene:Syt12 / 32290 FlyBaseID:FBgn0261085 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_021324208.1 Gene:sytl3 / 101882017 ZFINID:ZDB-GENE-040724-150 Length:581 Species:Danio rerio


Alignment Length:492 Identity:91/492 - (18%)
Similarity:170/492 - (34%) Gaps:167/492 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 MREGERKAPALKRRNSSTNPFLCESTEQIPSNPISEPLNATVASLEKTTISTSECTPITAPLETP 317
            :.:..:|.|::|..:.:|...:.:|.:::....:..|                  ||  .|...|
Zfish   133 LEQQAKKFPSVKENSETTGDKMLQSYQRLSFIAVVPP------------------TP--PPFYNP 177

  Fly   318 NGPISTDTPS--TIHHNGNPFVER-----ESLSSRLLKIHNTTNPFTGLSQR--VKGPHLL---Q 370
                    ||  .:..:..||.:.     .|:|:.:.|:..:.|..:.::.:  |...|::   :
Zfish   178 --------PSFNRLEEHKKPFTKSMENLVASVSAHIKKLSKSQNDLSEVAGQLTVDHGHMMYSRR 234

  Fly   371 KTISEDYLFRKLGVNCPMANGNGTGPGSGHVNGNGNGTWSFGRSLLRQDSTLSLGMGLGRRNSSQ 435
            |::|:                       |.:|          |:|.:..|...|........|:.
Zfish   235 KSLSD-----------------------GAIN----------RALCKVPSLPILSTAQSTSTSTL 266

  Fly   436 VSLDSHAGSVPGSMDGINLERAISCDSVTSDSTLFLDQLDQPYTQITGYLCVGLNYDQMSISNEG 500
            ...|....|.....|    ::..|..|...||.||.:.:     .:||.:.|.|.|     :|..
Zfish   267 CLTDDDVSSTSAYSD----DQRDSNSSTGMDSVLFENTI-----SVTGEIEVVLAY-----NNRT 317

  Fly   501 MELTVSVLEAKGLICPFSVESLDTFVRIYLVPD--HPGAMQTKVVKGTLTPSYNESF-------- 555
            ..|.:::...:.|:...:.:....:|.:.|:|.  |...|:|.|.||. .|.|||:|        
Zfish   318 SCLEITIKACRNLMFRDTKKKCHPYVNVCLLPKKCHNFKMKTAVRKGK-NPVYNETFTCVLSADL 381

  Fly   556 --------DFWLHKRQARHSLWFHLYHNGPAHTLIGEAEMEIGEMPRPITTWIPLSDSR-----K 607
                    ..| |.|..:..|:.       ..|||..|:|::.:           :||:     |
Zfish   382 LSSAVLQLSVW-HSRGLKRRLFL-------GETLIRLADMDLED-----------TDSQRSLCCK 427

  Fly   608 CNARW------GELMF-SLSYLPTAE--------------------RLTIVVVKARNLKLDGEQP 645
            .|.:.      .||.| |:..|..|:                    :||::......|.      
Zfish   428 LNPKAPQLGGDAELQFTSVLLLIQAQFHTLPHNNTQTHGVLLGAPGQLTVLFTDVSKLL------ 486

  Fly   646 APESAETVHSVFVKVYLMDKDRKVLKKRTSLKRKDRS 682
              ..::|.|  |..:..:...|::::|.::||:.|.|
Zfish   487 --SVSKTAH--FEGILCLPGHRELVRKTSALKKTDGS 519

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Syt12NP_572878.1 C2 503..602 CDD:425499 25/116 (22%)
C2B_Synaptotagmin-12 612..753 CDD:176051 18/98 (18%)