DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1622 and prpf38b

DIOPT Version :10

Sequence 1:NP_572872.1 Gene:CG1622 / 32282 FlyBaseID:FBgn0030468 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_998654.2 Gene:prpf38b / 406810 ZFINID:ZDB-GENE-040426-2878 Length:501 Species:Danio rerio


Alignment Length:400 Identity:189/400 - (47%)
Similarity:251/400 - (62%) Gaps:61/400 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GKQHNTLPFWGNESSMNLNALILANIQSSSYFKVHLFKLKTYHEVVDEIYYQVKHMEPWERGSRK 82
            ||..|.||.||||.:||||.:||.|:.||.||||.|::||||||||||||::|.|:||||:||||
Zfish    19 GKHGNNLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTYHEVVDEIYFKVNHVEPWEKGSRK 83

  Fly    83 TSGQTGMCGGVRGVGAGGIVSTAYCLLYKLYTLRLTRKQINGLLNHTDSAYIRALGFMYLRYTQP 147
            |:|||||||||||||.|||||||:||||||:||:|||||:.||:.|:||.|||||||||:|||||
Zfish    84 TAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHSDSPYIRALGFMYIRYTQP 148

  Fly   148 PGDLYDWYEDYLQDEEEIDVKAGGGQVLTIGQMVYQFMTKLDWFSTLFPRIPVPIQKQIEKRIEQ 212
            |.||.|||:::|.||||:|||||||.|:|:|:|:..|:|||:||||||||||||:||.|::.::.
Zfish   149 PPDLVDWYDEFLDDEEELDVKAGGGCVMTVGEMLRSFLTKLEWFSTLFPRIPVPVQKAIDQHMKS 213

  Fly   213 YCREQGVTVHQLSTGRSTAGTGGGPGAAGQDADYQDYPEGGVERGSGGRGGGQAGSRS-NAYPQP 276
            ..|:.                   |....|:.:.::  .........||.|.:..||: ...|.|
Zfish   214 RPRKP-------------------PQKDEQEEEEEE--ATAAPAADTGRHGDRRRSRTPRRSPSP 257

  Fly   277 NNYRNDYDERDYYAAASGSSY----------------GRGRGGYEDYPPAPLPPQMPYGERERER 325
            ...:|....|.::....|:|:                |:.|                  :|:|:|
Zfish   258 RKSQNRSRSRSHHRERHGASFDHELERERDRQRKEREGKDR------------------DRDRDR 304

  Fly   326 DRDRDKNKDYDRHRSKHKKKHNHRQSSRSRSRSRSRSRHRSERHERK-----RDGGGYERSSKSR 385
            ||:||:.:|.||.||:...::..|:.||||.|.||||..|.:|.|||     |:.......|:.:
Zfish   305 DRERDRERDRDRRRSRTPDRNTERRRSRSRERRRSRSTSRDKRTERKDRDKDREAESERERSRKK 369

  Fly   386 HNEHYEERER 395
            ..||:::|||
Zfish   370 DREHHKDRER 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1622NP_572872.1 PRP38 24..205 CDD:460901 134/180 (74%)
prpf38bNP_998654.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28 5/8 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 208..501 49/210 (23%)

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