DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HDAC4 and hdac7b

DIOPT Version :10

Sequence 1:NP_001259507.1 Gene:HDAC4 / 32278 FlyBaseID:FBgn0041210 Length:1269 Species:Drosophila melanogaster
Sequence 2:XP_017212138.1 Gene:hdac7b / 792596 ZFINID:ZDB-GENE-131127-113 Length:751 Species:Danio rerio


Alignment Length:799 Identity:281/799 - (35%)
Similarity:398/799 - (49%) Gaps:175/799 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   578 HKQGHRPLGR----TQSAPLPL-GHPMLTGA-VQLNVVQTHYENSEAERQAYEHQVVNQKVRQTV 636
            |.|.||.|.|    ||...|.| .....||| ..|:|          .|:.||: :.|::.|   
Zfish     3 HHQQHRTLERGRRSTQEDKLSLRKESEQTGAGCSLSV----------RRKLYEY-ICNKQHR--- 53

  Fly   637 LTRSGAAAAAAAAAGVSV-VREAQLKEEDDD---SAAE-VMDLTDKKKPPKTVLTSTIATSTSQN 696
                       .:||..: .||...:|||:.   :|:| ::.|..|:.  .|...:.:...||  
Zfish    54 -----------TSAGQDIQQRELDRQEEDNPLRRTASEPILKLRSKRS--MTGRQNPLQRKTS-- 103

  Fly   697 LPEALAAAAAAAAYRAPHNASSNSASATKSGI--KLRDQEYLQQQREQLLLLQQEEELAKSLMRP 759
                     |..|...|.:.:.:::|||.|.:  ::..||.:|.........:::..|..|:..|
Zfish   104 ---------APPAVGDPDSMAVSASSATVSSLDNQMNRQELIQTTTYSASSGKEDSPLQISIQHP 159

  Fly   760 L-----SRTLSSPLV-PLGPHGLSQIPDTGQQ-----PAPIATSSSAD---------HIPPVNLS 804
            :     :.|..:|.| .|.||..:.   ||||     ..|:..|.||.         |.|...|.
Zfish   160 VLWPAYAATAYNPQVFTLYPHIFTV---TGQQWPPMPHRPLIKSQSAPSYIQQYTHIHTPAYTLV 221

  Fly   805 LP-------------------------------------------------------HRQHRQLM 814
            .|                                                       :||..||.
Zfish   222 QPMYQQQWPQETFQQHTLPEKVSVGPAWPESPGDLGRFRKRTSEEVRISSQSPLESCNRQGVQLK 286

  Fly   815 STL--------------------YASQLRNHQPSASGSPPHKVTTGLAYDPLMLKHSCICGDNAQ 859
            ..|                    :.::|.:|..||........||||.|:  |:||.|.|.|::.
Zfish   287 ENLEWRHKIFHQQVSRVHSFPDTFDTRLSSHSASALDMRKPNFTTGLVYE--MMKHRCDCRDSSC 349

  Fly   860 HPEHSGRLQSVWARLNETDLVKRCDRLRARKATQEELQTVHTEAHAMLFGSNQCQLSRPKLENTL 924
            ....:.|:.|:|:||.|..|..:|..|:.|.||.|||.:||:|.....|...:...|:       
Zfish   350 GLHEADRVTSIWSRLQECGLRSQCKLLKGRSATVEELLSVHSEELVCFFTGPEPYRSQ------- 407

  Fly   925 SASFVRLSCGGLGVDLDTTWNEHHTATAARMAAGCVIDLALKTAKGDLRNGFAVVRPPGHHAEAN 989
                         :|:.|.|.....:.|.:||.|.|.:|||..|:||||||||||.||||||..:
Zfish   408 -------------MDIGTMWKNPRNSEALKMAVGSVTELALCVARGDLRNGFAVVTPPGHHASRS 459

  Fly   990 LAMGFCFFNSIAIAAKLLRQRMPEVRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFF 1054
            ..:....|||:|||||.|:::: :|::|||||||||||:||:..||..|.:||:|:||:|||.||
Zfish   460 QTLDSIVFNSVAIAAKQLQEQL-KVKKILIVDWDVHHGSGTESIFYTDPSVLYISLHRYDDGAFF 523

  Fly  1055 PGTGGPTECGSGAGLGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAA 1119
            .|||.|:..|...|.|:|||::|||.|.||:|||||:|||||||||||..|:|::||||:|||||
Zfish   524 NGTGDPSRVGCDVGRGYNVNVAWSGGLRPPMGDAEYLAAFRTVVMPIAHEFSPNVVLVSAGFDAA 588

  Fly  1120 TGHPAPLGGYHVSPACFGFMTRELLQLANGKVVLALEGGYDLAAICDSAQECVRALLGDPAAPIA 1184
            .||||.||||.|||.|||::|::|::||.|:|||.|||||:|.::||::|.||.||||:...|::
Zfish   589 EGHPAALGGYRVSPKCFGWLTQKLMELAEGRVVLVLEGGYELVSLCDASQACVSALLGNEPEPLS 653

  Fly  1185 KAELERPPCQNAINTLQKTIAIQQTHWPCVRMLEHTVGLSALETLKVEHDESETINAMAGLSMQS 1249
            :.||.|.||.||:.:|:|.:.:|..||..||.:.:||.||.::..:.....||....::||:|..
Zfish   654 EVELLRSPCANAVCSLEKVLHVQSLHWRSVRSMLNTVSLSYVKAERRVSAGSEAALVLSGLNMTV 718

  Fly  1250 MHRTLSRDDSEEPMDQDET 1268
            .||   |....||::.|||
Zfish   719 PHR---RQLPNEPVEDDET 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HDAC4NP_001259507.1 ClassIIa_HDAC_Gln-rich-N 43..>87 CDD:421006
HDAC_classIIa 837..1211 CDD:212544 186/373 (50%)
hdac7bXP_017212138.1 Arginase_HDAC 329..680 CDD:450134 186/373 (50%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.