DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mew and zmp:0000001082

DIOPT Version :9

Sequence 1:NP_001285196.1 Gene:mew / 32275 FlyBaseID:FBgn0004456 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_001373553.1 Gene:zmp:0000001082 / 557935 ZFINID:ZDB-GENE-140106-42 Length:1151 Species:Danio rerio


Alignment Length:1324 Identity:294/1324 - (22%)
Similarity:486/1324 - (36%) Gaps:411/1324 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ILIILQCVLTCYNFNLEQRLPIVKYGHPHSHFGYSVATHTIGEANGPNKTNCVLVGAPLDQN--- 82
            :..:|.|......||::...|:|..|.....|||||        :....:..::|||||.:|   
Zfish     5 VFTLLMCACLSEAFNMDTEHPLVYNGSAADFFGYSV--------HQSESSTQIIVGAPLARNSTG 61

  Fly    83 ---------------RQPNTT-----------------------------------------HSG 91
                           |:|::.                                         :||
Zfish    62 EIYTCASDLRSCKALRRPDSERVRFFSMSVSVSPDAPLTSCSPYLPHDCDGNSYLNGICYQFNSG 126

  Fly    92 ALWRCPMTQRFDDCEQ------VITDGRR-----------NFDSEILSPPGNDEIKEDQWMGVTV 139
            .......|..:.:|.:      .:.||.|           :|.::|:....|..||.......|.
Zfish   127 LQAVSNFTAAYQECTKREVNLVFLFDGSRSMKPEEFDLNKDFITDIMKKLSNSSIKFAAVQFATT 191

  Fly   140 RSNPLQAN----GSGGK---------VIVCAHRYMYIVRENRY----------GQGLCYLLTN-- 179
            .|.....|    ||..:         .:...|..:..|.||..          .|....::|:  
Zfish   192 FSTVFDFNDYQLGSAEQKLQKEKHMSALTNTHGAIKYVLENLLNNVSSGANPKAQHALVIITDGD 256

  Fly   180 --DLQFEEVHEPCKGRPVQR---------------------QH------EDY------------- 202
              |...|.|.|.|..:.:.|                     :|      :||             
Zfish   257 PTDRDNEHVLEKCDKQNILRYIIGVGGLANLARLTSLASEPKHNNTFFIKDYKGLEGLLDNLQKK 321

  Fly   203 -----------------GLCQAGTSAALLDDDTMVLGSPGPYTWRGSIWVTQVGGEYLQRDKTTY 250
                             .|.|:|.| .:...|::::||.|...||||::.....|..::      
Zfish   322 IYNIEGSTEAHSKDRLKELSQSGFS-VINHKDSVIVGSVGSNDWRGSLYEVTGSGSGVK------ 379

  Fly   251 YSDHSDLNSP-VDKYSYLGMSVTGGRFFGHMSYAAGAPRSEGHGQVVIFDKSTDNPIPVHSILDG 314
               .:::..| |.|.||:|.|...|...|.....:||||:|..|.|.:|.|: |:...|...:.|
Zfish   380 ---ETEIRDPFVSKDSYMGYSAVLGARAGVSFLFSGAPRAEHMGLVTLFIKN-DSSWRVSWNISG 440

  Fly   315 EQFGSSFGYELATADINGDHRPD-LIVAAPLYF---TKTEGGAVYVYQNIQDTLPMKYTLKLTGP 375
            ||.||.||..|:..|::.|...| |:|.|||:.   .:.| |.:||| ...|. |.:..|.::|.
Zfish   441 EQIGSYFGASLSLLDVDSDGDSDFLLVGAPLFHQSQPRAE-GKLYVY-TFSDG-PFQKMLNVSGS 502

  Fly   376 LESRFGLALANIGDLNKDNCEDLAVGAPYE--GNGVVYIYLGSS-QGLNSKPA-QKIQASELGGT 436
            ...||..:||::.|||.|:..|:|||||.|  |.||||||||.. :|:|...| |:|.    |.:
Zfish   503 NIGRFSASLASLKDLNGDSLSDVAVGAPLENDGEGVVYIYLGDGMRGINLNHAPQRIS----GRS 563

  Fly   437 IPNGQPIRTFGISISGNTDLDDNSYPDVVIGAFNSSAAVILLARPI--ISIQTSVQRKELHNMDP 499
            :..|  ::.||:|:||..|:.|::..||||||  ....|:|.|||:  :|:|.|....|: |:  
Zfish   564 VLPG--LQQFGVSLSGQMDMSDDNLTDVVIGA--RGGMVLLKARPVMSVSVQLSFSPNEI-NL-- 621

  Fly   500 NTPGCLDDPASNLTCFTFRACCSIEPYDEKNKELRLAYSVEAE-TFDHLKKFSRVFFFDRENKRT 563
            |...|..|...|:  |...:|.:::.....|..|....:|..| ..|.::..:|.||..|::. :
Zfish   622 NYFECPSDKVLNV--FNLTSCFTMKEQTSSNGSLDKKLNVSLELNVDVMRGINRGFFVQRDSS-S 683

  Fly   564 NVLSRVVRVHTNGRTECQAVTGYIKANTRDIQTPVRFRLKYSLVEPPLADSALVRLNPILDQTQA 628
            ..|.:::.:.:.  ..|::...::.....|..:|::.|:.:|..|  ::.|::..|: :..:|:.
Zfish   684 KALQQLLLLDSG--IFCRSFPVFMPGCVADTVSPLKIRMNFSQSE--MSGSSVAVLD-VYSRTEE 743

  Fly   629 HVDFEGTFQKDCGDDDLCESNLIIRVEPNITESSGNEYTLILDETELEVRINVSNLADSAYEAQL 693
            :|  |..||::|..::.|.::|      .:..|..|...::.::....:.|::.|..|.::...:
Zfish   744 YV--EVPFQRNCNSNNSCVADL------KLDFSFRNNTLVVANQAHFTLLISLENPGDDSFNTSI 800

  Fly   694 FIAHQAGVSY--VATKKP--TNATC---NSYNTTLVACSLGNPMLRDTTTF---VTIRFQPKGLE 748
            .:.:..|:|.  ..|.||  |.::|   :|..|....||:..|:.|..||.   .|.|......:
Zfish   801 VLHYPDGLSLSNFLTVKPSRTRSSCGDRDSGATNRTTCSINLPVYRSGTTTQFQATFRVSKWDYD 865

  Fly   749 PSEKIMLFHIFANTTSKLVGPERPERDLRVNVVRRAKLNFRGWAIPEQSFYSGSSVANSVANTAA 813
            .|: :|...|.||:            |...|.                   |.::|..||....|
Zfish   866 WSD-MMEMMITANS------------DNNGNT-------------------SAAAVRRSVPVQFA 898

  Fly   814 TDIEGHGPMGMDDVGSQVHHMFTIFNEGPSTAPKVQMVIHWPYSLYSDPQSGRPVQYLLYLEQVP 878
            .|:    .:.:....|..:..|::.:.||.....|       |.:.:....|.||:..|:| ..|
Zfish   899 VDV----AISLSAEDSVTYLNFSLEDRGPKPLRIV-------YKVENLGVKGLPVRVSLHL-PCP 951

  Fly   879 TVEVSQGECHVAKEYVNPLNLASGSRENPAYLSAPAQMRMFPSQSRHSFNKSLIHSQRSYYSSSH 943
            |               .|:.|                       |:..|  |:..:......:|.
Zfish   952 T---------------TPVRL-----------------------SKQKF--SVQQNSTDVACTSS 976

  Fly   944 RDDHSDDTQSNRNRVRRSFLERVTRLERLMYDPESSNAANGKKQDIVELDCNKGATNCVRIECDI 1008
            .|||                                                     |..|||..
Zfish   977 EDDH-----------------------------------------------------CETIECSQ 988

  Fly  1009 LNMPALSEAQVVVKARLWNSTL--VSEYPRVERVRIFSTATAQIPESYGVEVMDHNNIEVETRAY 1071
            .::...|..|.::.|   ::|.  |.||..       ..:..::.:.:.:      ||..|.. |
Zfish   989 FHLDKHSVVQFILTA---DATFQSVKEYES-------KFSFQELRKDFSL------NISAELN-Y 1036

  Fly  1072 PELRNQQRDTSIP--------------------WLIIILGIVGGLLLLALVTYVLWKVGFFKRIR 1116
            ...|..|..|.:.                    .|||.:|..|||:||.::.::|.|.|||||.|
Zfish  1037 NRSRYNQTSTGLKDDPHKSQITVKAEFVLPPNRMLIISVGAGGGLILLIIIFFLLVKCGFFKRRR 1101

  Fly  1117 PTD-PTLSGN---LEKMNEEKPFL 1136
            |.: |:.:.:   ||...|:.|.:
Zfish  1102 PEEFPSQTDDVSALENSPEDSPLM 1125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mewNP_001285196.1 Int_alpha 48..111 CDD:214549 17/127 (13%)
Int_alpha 317..368 CDD:214549 20/54 (37%)
Int_alpha 378..428 CDD:214549 28/53 (53%)
Int_alpha 446..491 CDD:214549 21/46 (46%)
Integrin_alpha2 479..1006 CDD:285619 99/539 (18%)
zmp:0000001082NP_001373553.1 vWFA 145..314 CDD:412136 28/168 (17%)
Int_alpha 443..491 CDD:214549 18/49 (37%)
Int_alpha 505..>546 CDD:214549 24/40 (60%)
Integrin_alpha2 602..951 CDD:400650 86/411 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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